C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, CCHC domain containing 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000083223 ZCCHC6 9606 - 9:86287733-86354454 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000277141 ZCCHC6-003 86287733-86354410 protein_coding
  ENST00000375947 ZCCHC6-006 86344870-86352706 protein_coding
  ENST00000375948 ZCCHC6-005 86336879-86343123 protein_coding
  ENST00000375957 ZCCHC6-002 86287735-86319644 protein_coding
  ENST00000375960 ZCCHC6-004 86287733-86354454 protein_coding
  ENST00000375963 ZCCHC6-001 86287959-86354412 protein_coding
  ENST00000469004 ZCCHC6-007 86323628-86324653 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000277141ENST00000375957ENST00000375960ENST00000375963
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000277141 0.827±0.00 0.381±0.00 0.721±0.00 0.260±0.00 N/A 1.136±0.00 0.559±0.00 2.177±0.00 0.384±0.00 1.510±0.00 0.139±0.00 1.070±0.17 1.247±0.00 0.804±0.20
ENST00000375957 N/A 1.759±0.00 N/A 0.526±0.00 0.918±0.00 0.773±0.00 N/A 1.382±0.00 N/A N/A 0.719±0.40 6.660±3.52 2.877±2.04 1.972±0.72
ENST00000375960 N/A N/A 1.040±0.00 0.589±0.28 0.803±0.00 0.848±0.00 N/A 0.514±0.00 N/A N/A 0.814±0.49 N/A N/A N/A
ENST00000375963 2.082±0.00 1.146±0.00 N/A 0.808±0.20 2.063±0.25 0.863±0.02 1.273±0.00 1.997±0.98 0.978±0.00 1.016±0.00 1.715±0.00 1.849±0.45 1.033±0.03 2.550±0.82

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00007D CIL_00007D_0002 CGP 9:86264546-86354454
CIL_0000YF CIL_0000YF_0001 CGP 9:86287733-86947189

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0008270 IEA zinc ion binding
GO:0031123 IDA RNA 3'-end processing
GO:0044822 IDA poly(A) RNA binding
GO:0050265 IDA RNA uridylyltransferase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074645 ZCCHC6 zinc finger, CCHC domain containing 6 protein_coding Danio_rerio
ENSMUSG00000035248 Zcchc6 zinc finger, CCHC domain containing 6 protein_coding Mus_musculus

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