C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: progesterone immunomodulatory binding factor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000083535 PIBF1 9606 + 13:72782059-73016461 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000326291 PIBF1-001 72782059-73016461 protein_coding
  ENST00000469712 PIBF1-006 72969639-73016068 processed_transcript
  ENST00000486330 PIBF1-004 72884444-72893871 processed_transcript
  ENST00000489797 PIBF1-002 72782154-72798026 processed_transcript
  ENST00000489922 PIBF1-005 72969603-73016061 processed_transcript
  ENST00000492803 PIBF1-003 72797909-72835276 processed_transcript
  ENST00000615625 PIBF1-201 72782225-73015980 protein_coding
  ENST00000617689 PIBF1-007 72782140-72974251 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000326291ENST00000617689
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000326291 2.062±0.00 2.841±0.00 N/A 1.380±0.02 1.811±0.31 0.982±0.00 2.016±0.00 2.130±0.00 1.554±0.00 2.508±0.00 1.532±0.00 4.021±0.13 1.622±0.80 3.753±0.00
ENST00000617689 N/A N/A 2.050±0.00 1.276±0.00 3.295±0.00 4.657±0.00 1.613±0.00 2.847±0.00 2.678±0.00 3.276±0.00 0.834±0.00 6.379±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095B CIL_00095B_0001 VISTA 13:72193463-72794242
CIL_000955 CIL_000955_0001 VISTA 13:72204429-72805745
CIL_0009CH CIL_0009CH_0001 VISTA 13:72207309-72809616
CIL_0009CG CIL_0009CG_0001 VISTA 13:72212874-72814683
CIL_000956 CIL_000956_0001 VISTA 13:72274916-72875890
CIL_0009CJ CIL_0009CJ_0001 VISTA 13:72350262-72951768
CIL_0005KC CIL_0005KC_0002 CGP 13:72727749-72782096
CIL_0002NH CIL_0002NH_0001 CGP 13:72752169-73016461
CIL_00015J CIL_00015J_0001 CGP 13:72782059-73077542

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005813 IDA centrosome
GO:0016020 IEA membrane
GO:0016192 IEA vesicle-mediated transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013006 pibf1 progesterone immunomodulatory binding factor 1 protein_coding Danio_rerio
ENSMUSG00000022064 Pibf1 progesterone immunomodulatory binding factor 1 protein_coding Mus_musculus

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