C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 27 (fatty acid transporter), member 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000083807 SLC27A5 9606 - 19:58479512-58512413 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000263093 SLC27A5-001 58498337-58512065 protein_coding
  ENST00000593745 SLC27A5-007 58507382-58512413 retained_intron
  ENST00000594683 SLC27A5-003 58500594-58510172 retained_intron
  ENST00000594786 SLC27A5-004 58498333-58499275 protein_coding
  ENST00000595851 SLC27A5-008 58479512-58499263 nonsense_mediated_decay
  ENST00000599700 SLC27A5-005 58498337-58499241 processed_transcript
  ENST00000601355 SLC27A5-002 58498386-58511992 protein_coding
  ENST00000601997 SLC27A5-006 58498475-58499142 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263093ENST00000593745ENST00000594786ENST00000595851ENST00000601355
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263093 N/A N/A N/A N/A N/A N/A 89.087±0.00 51.622±0.00 N/A N/A N/A N/A N/A
ENST00000593745 0.427±0.00 1.155±0.00 N/A 0.684±0.00 0.427±0.15 0.258±0.00 0.626±0.00 N/A N/A N/A N/A N/A 2.333±0.00
ENST00000594786 N/A N/A 11.186±7.77 N/A 5.988±0.00 N/A N/A 114.823±0.00 N/A N/A N/A N/A 23.955±0.00
ENST00000595851 2.109±0.00 3.834±0.00 N/A 2.747±0.00 N/A 0.981±0.00 2.938±0.00 N/A 3.064±0.00 0.787±0.00 4.956±0.00 2.225±0.43 5.836±0.00
ENST00000601355 N/A N/A N/A N/A N/A N/A N/A 40.391±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00049W CIL_00049W_0001 CGP 19:58467045-58481230
CIL_0004A4 CIL_0004A4_0001 CGP 19:58474017-58512413
CIL_00070R CIL_00070R_0001 CGP 19:58479512-58538911

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000038 IDA very long-chain fatty acid metabolic process
GO:0003824 IEA catalytic activity
GO:0005524 IEA ATP binding
GO:0005783 IDA endoplasmic reticulum
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006642 IEA triglyceride mobilization
GO:0006699 IDA bile acid biosynthetic process
GO:0008152 IEA metabolic process
GO:0008206 TAS bile acid metabolic process
GO:0009925 IEA basal plasma membrane
GO:0015245 IEA fatty acid transporter activity
GO:0015721 TAS bile acid and bile salt transport
GO:0015908 IEA fatty acid transport
GO:0015911 IEA plasma membrane long-chain fatty acid transport
GO:0030176 IDA integral component of endoplasmic reticulum membrane
GO:0031957 IDA very long-chain fatty acid-CoA ligase activity
GO:0032403 IEA protein complex binding
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0043234 IEA protein complex
GO:0044281 TAS small molecule metabolic process
GO:0046951 IEA ketone body biosynthetic process
GO:0047747 IEA cholate-CoA ligase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000030382 Slc27a5 solute carrier family 27 (fatty acid transporter), member 5 protein_coding Mus_musculus

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