C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000085998 POMGNT1 9606 - 1:46188682-46220305 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000371984 POMGNT1-001 46188683-46198443 protein_coding
  ENST00000371992 POMGNT1-002 46188683-46220305 protein_coding
  ENST00000396420 POMGNT1-201 46188682-46220291 protein_coding
  ENST00000463030 POMGNT1-007 46191616-46192341 processed_transcript
  ENST00000475642 POMGNT1-005 46188684-46189567 processed_transcript
  ENST00000477114 POMGNT1-009 46193383-46194651 processed_transcript
  ENST00000480972 POMGNT1-006 46189519-46190972 processed_transcript
  ENST00000485714 POMGNT1-004 46190117-46193800 processed_transcript
  ENST00000489985 POMGNT1-003 46195484-46198102 processed_transcript
  ENST00000497439 POMGNT1-008 46194582-46198360 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000371984ENST00000485714ENST00000489985ENST00000497439
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000371984 6.362±0.00 14.801±0.00 1.007±0.00 12.173±6.40 9.583±8.09 3.877±2.88 20.221±17.71 15.209±13.51 8.162±6.72 6.608±6.12 15.542±11.66 12.375±7.43 21.932±4.49 14.525±0.89
ENST00000485714 N/A N/A N/A N/A N/A 1.055±0.00 N/A N/A N/A 0.731±0.00 N/A N/A N/A N/A
ENST00000489985 N/A N/A 1.925±0.00 N/A N/A 1.785±0.00 N/A 1.054±0.00 N/A N/A N/A N/A N/A N/A
ENST00000497439 N/A N/A N/A N/A 1.623±0.00 N/A N/A 1.382±0.00 N/A N/A 2.379±0.00 2.046±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001N5 CIL_0001N5_0001 CGP 1:46188682-46221261

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0006486 IEA protein glycosylation
GO:0006493 IDA protein O-linked glycosylation
GO:0008375 IEA acetylglucosaminyltransferase activity
GO:0016021 IEA integral component of membrane
GO:0047223 IDA beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000052025 pomgnt1 protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase protein_coding Danio_rerio
ENSMUSG00000028700 Pomgnt1 protein O-linked mannose beta 1,2-N-acetylglucosaminyltransferase protein_coding Mus_musculus

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