C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein phosphatase, EF-hand calcium binding domain 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000086717 PPEF1 9606 + X:18675909-18827921 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000349874 PPEF1-201 18690926-18827917 protein_coding
  ENST00000361511 PPEF1-001 18690913-18827921 protein_coding
  ENST00000379962 PPEF1-002 18730164-18827660 retained_intron
  ENST00000470157 PPEF1-008 18818095-18827547 protein_coding
  ENST00000471570 PPEF1-003 18700051-18749952 processed_transcript
  ENST00000472826 PPEF1-007 18707654-18761576 protein_coding
  ENST00000486029 PPEF1-005 18675909-18697909 processed_transcript
  ENST00000496075 PPEF1-004 18707658-18789200 protein_coding
  ENST00000496616 PPEF1-006 18700051-18749955 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000349874ENST00000361511ENST00000379962ENST00000470157ENST00000471570ENST00000472826ENST00000486029ENST00000496075ENST00000496616
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000349874 N/A 0.034±0.00 N/A N/A N/A N/A N/A N/A N/A 0.034±0.00 N/A N/A N/A
ENST00000361511 N/A N/A 0.857±0.60 N/A N/A N/A N/A N/A N/A N/A 0.037±0.02 0.155±0.00 7.852±1.88
ENST00000379962 0.016±0.00 N/A N/A 0.101±0.00 N/A 0.056±0.03 N/A N/A 0.045±0.00 N/A 0.017±0.00 0.084±0.05 N/A
ENST00000470157 N/A N/A N/A N/A 0.219±0.00 0.067±0.00 0.234±0.00 N/A 1.497±0.00 N/A N/A 0.046±0.00 N/A
ENST00000471570 0.008±0.00 0.090±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.119±0.00 0.030±0.00 N/A
ENST00000472826 N/A N/A N/A 0.177±0.00 N/A N/A N/A N/A 0.347±0.00 N/A N/A N/A N/A
ENST00000486029 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.067±0.00 N/A N/A
ENST00000496075 N/A N/A 1.787±0.00 0.216±0.00 N/A N/A N/A 0.072±0.00 N/A N/A 0.054±0.03 N/A N/A
ENST00000496616 0.007±0.00 0.076±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.031±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002KY CIL_0002KY_0002 CGP X:18639910-18827921

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004721 IEA phosphoprotein phosphatase activity
GO:0004722 TAS protein serine/threonine phosphatase activity
GO:0005506 IEA iron ion binding
GO:0005509 IEA calcium ion binding
GO:0005515 IPI:IEA protein binding
GO:0005829 TAS cytosol
GO:0006470 TAS protein dephosphorylation
GO:0007603 TAS phototransduction, visible light
GO:0016056 TAS rhodopsin mediated signaling pathway
GO:0016311 IEA dephosphorylation
GO:0016787 IEA hydrolase activity
GO:0022400 TAS regulation of rhodopsin mediated signaling pathway
GO:0030145 IEA manganese ion binding
GO:0050906 IEA detection of stimulus involved in sensory perception

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020191 ppef1 protein phosphatase, EF-hand calcium binding domain 1 protein_coding Danio_rerio
ENSMUSG00000062168 Ppef1 protein phosphatase with EF hand calcium-binding domain 1 protein_coding Mus_musculus

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