C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ALG6, alpha-1,3-glucosyltransferase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000088035 ALG6 9606 + 1:63367590-63438562 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000263440 ALG6-006 63370770-63437177 protein_coding
  ENST00000371108 ALG6-001 63367590-63438562 protein_coding
  ENST00000462390 ALG6-005 63419394-63429829 processed_transcript
  ENST00000465969 ALG6-003 63413656-63429126 processed_transcript
  ENST00000487136 ALG6-002 63367650-63402342 nonsense_mediated_decay
  ENST00000494765 ALG6-004 63428238-63437133 processed_transcript
  ENST00000603108 ALG6-007 63370770-63437175 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263440ENST00000371108ENST00000465969ENST00000494765ENST00000603108
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263440 1.329±0.00 1.254±0.00 N/A 0.621±0.22 1.806±0.88 1.769±0.00 0.739±0.00 1.495±1.09 1.249±0.34 0.906±0.02 1.286±0.00 2.563±0.79 3.021±0.86 1.892±1.13
ENST00000371108 0.218±0.00 N/A 0.323±0.00 N/A 0.345±0.00 0.165±0.00 0.145±0.00 0.318±0.26 0.124±0.00 0.217±0.00 N/A 0.700±0.00 0.477±0.09 0.403±0.00
ENST00000465969 N/A N/A N/A 0.405±0.00 N/A N/A N/A N/A N/A 1.758±0.00 N/A N/A N/A 0.867±0.00
ENST00000494765 N/A N/A N/A N/A N/A 1.030±0.00 N/A N/A 0.706±0.00 N/A N/A 0.554±0.00 N/A N/A
ENST00000603108 N/A 0.950±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.885±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KW CIL_0007KW_0001 UCNEbase 1:62876629-63449336
CIL_0008AH CIL_0008AH_0001 VISTA 1:62899548-63500451
CIL_0002G4 CIL_0002G4_0001 CGP 1:63323041-63438562
CIL_0002G7 CIL_0002G7_0001 CGP 1:63367590-63593721

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005789 IEA endoplasmic reticulum membrane
GO:0006487 IGI protein N-linked glycosylation
GO:0006488 TAS dolichol-linked oligosaccharide biosynthetic process
GO:0008152 IEA metabolic process
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016758 IEA transferase activity, transferring hexosyl groups
GO:0018279 TAS protein N-linked glycosylation via asparagine
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0046527 IDA glucosyltransferase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017617 alg6 asparagine-linked glycosylation 6 homolog (S. cerevisiae, alpha-1,3-glucosyltransferase) protein_coding Danio_rerio
ENSMUSG00000073792 Alg6 asparagine-linked glycosylation 6 (alpha-1,3,-glucosyltransferase) protein_coding Mus_musculus

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