C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ArfGAP with SH3 domain, ankyrin repeat and PH domain 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000088280 ASAP3 9606 - 1:23428563-23484568 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000336689 ASAP3-001 23428563-23484178 protein_coding
  ENST00000437606 ASAP3-011 23429722-23484179 protein_coding
  ENST00000449467 ASAP3-012 23455991-23480179 processed_transcript
  ENST00000465372 ASAP3-006 23429532-23433532 protein_coding
  ENST00000475814 ASAP3-009 23436927-23442271 nonsense_mediated_decay
  ENST00000478858 ASAP3-010 23441350-23484192 retained_intron
  ENST00000484418 ASAP3-008 23433203-23436968 nonsense_mediated_decay
  ENST00000492982 ASAP3-007 23429627-23484184 nonsense_mediated_decay
  ENST00000495646 ASAP3-005 23428563-23436677 protein_coding
  ENST00000530874 ASAP3-013 23436964-23439016 retained_intron
  ENST00000608765 ASAP3-014 23451479-23484568 protein_coding
  ENST00000618240 ASAP3-201 23428563-23484564 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000336689ENST00000437606ENST00000478858ENST00000484418ENST00000492982ENST00000495646
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000336689 5.682±0.00 1.698±0.00 N/A 2.382±0.00 3.097±0.00 2.455±1.98 5.034±3.23 4.578±4.42 3.117±0.00 2.193±0.89 17.858±16.29 13.678±16.95 14.800±3.77 11.244±0.95
ENST00000437606 N/A N/A N/A 0.420±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478858 N/A N/A N/A N/A N/A N/A N/A 1.517±0.00 N/A N/A N/A N/A N/A N/A
ENST00000484418 N/A N/A N/A N/A N/A 2.022±0.00 N/A 0.812±0.00 N/A N/A N/A 2.189±0.00 27.570±0.00 22.128±0.00
ENST00000492982 N/A N/A 0.413±0.00 N/A N/A N/A N/A 0.791±0.00 N/A N/A N/A 0.460±0.00 N/A N/A
ENST00000495646 2.662±0.00 1.125±0.00 N/A N/A 4.066±0.00 N/A N/A 7.711±0.00 2.205±0.00 2.646±0.00 8.664±0.00 12.357±0.16 5.867±1.14 5.551±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WE CIL_0002WE_0002 CGP 1:23428563-23531220

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001726 IDA ruffle
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005925 IEA:IDA focal adhesion
GO:0008060 IEA:IDA ARF GTPase activator activity
GO:0008270 IEA zinc ion binding
GO:0016477 IEA:IMP cell migration
GO:0032312 IEA regulation of ARF GTPase activity
GO:0032850 IEA:IDA positive regulation of ARF GTPase activity
GO:0051492 IMP regulation of stress fiber assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021896 asap3 ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 protein_coding Danio_rerio
ENSMUSG00000036995 Asap3 ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 protein_coding Mus_musculus

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