C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 3 open reading frame 18
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000088543 C3orf18 9606 - 3:50558025-50571027 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000357203 C3orf18-014 50558031-50567751 protein_coding
  ENST00000422619 C3orf18-013 50559525-50561911 protein_coding
  ENST00000426034 C3orf18-003 50558025-50567665 protein_coding
  ENST00000430746 C3orf18-007 50559222-50567680 nonsense_mediated_decay
  ENST00000441239 C3orf18-006 50558811-50567676 protein_coding
  ENST00000449241 C3orf18-001 50558032-50570991 protein_coding
  ENST00000464080 C3orf18-009 50559454-50571027 processed_transcript
  ENST00000484982 C3orf18-011 50559599-50567625 processed_transcript
  ENST00000485902 C3orf18-008 50559280-50567642 processed_transcript
  ENST00000486175 C3orf18-012 50559283-50567621 processed_transcript
  ENST00000491269 C3orf18-010 50565384-50567676 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverMuscleOvaryPlacentaTestisENST00000357203ENST00000426034ENST00000449241ENST00000486175
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Muscle Ovary Placenta Testis
ENST00000357203 N/A N/A 0.372±0.00 0.895±0.00 2.343±0.00 N/A 0.272±0.00 N/A N/A N/A N/A 3.583±0.00
ENST00000426034 1.382±0.00 3.162±0.00 N/A 5.506±0.00 2.872±0.00 2.322±0.00 4.368±3.78 0.825±0.00 0.641±0.00 4.728±0.95 1.704±0.00 7.037±0.00
ENST00000449241 N/A N/A N/A 1.145±0.00 0.676±0.00 N/A N/A 1.292±0.00 N/A N/A N/A N/A
ENST00000486175 N/A N/A N/A N/A N/A N/A N/A N/A 4.372±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D8 CIL_0008D8_0001 VISTA 3:50299047-50902727

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078609 C6H3orf18 (1 of 2) chromosome 3 open reading frame 18 protein_coding Danio_rerio
ENSDARG00000097079 C6H3orf18 (2 of 2) chromosome 3 open reading frame 18 protein_coding Danio_rerio
ENSMUSG00000037977 6430571L13Rik RIKEN cDNA 6430571L13 gene protein_coding Mus_musculus

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