C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cell death-inducing p53 target 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000089486 CDIP1 9606 - 16:4510675-4538828 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000399599 CDIP1-005 4510739-4515109 protein_coding
  ENST00000562334 CDIP1-007 4511933-4538773 protein_coding
  ENST00000562579 CDIP1-012 4512454-4538775 protein_coding
  ENST00000563186 CDIP1-011 4512867-4514664 protein_coding
  ENST00000563332 CDIP1-004 4510675-4538470 protein_coding
  ENST00000563507 CDIP1-002 4511806-4538784 protein_coding
  ENST00000564828 CDIP1-006 4511421-4538828 protein_coding
  ENST00000566234 CDIP1-015 4514045-4522525 protein_coding
  ENST00000567695 CDIP1-001 4511324-4538784 protein_coding
  ENST00000586728 CDIP1-014 4513694-4538404 protein_coding
  ENST00000586768 CDIP1-016 4523827-4538773 processed_transcript
  ENST00000588381 CDIP1-013 4512916-4538469 protein_coding
  ENST00000589159 CDIP1-018 4512399-4514664 nonsense_mediated_decay
  ENST00000589890 CDIP1-017 4512798-4514149 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000399599ENST00000562334ENST00000563332ENST00000563507ENST00000564828ENST00000567695ENST00000588381ENST00000589159
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000399599 N/A N/A N/A 1.292±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562334 N/A N/A 10.020±0.00 N/A 0.879±0.00 0.608±0.00 N/A 1.125±0.00 0.332±0.00 N/A N/A 2.846±0.00 3.558±0.00
ENST00000563332 N/A N/A 4.345±0.00 0.609±0.00 N/A N/A N/A N/A N/A N/A 6.052±1.41 3.567±1.87 N/A
ENST00000563507 N/A N/A N/A N/A 1.259±0.00 N/A N/A N/A N/A 1.555±0.00 N/A N/A N/A
ENST00000564828 3.468±0.00 5.823±0.00 35.186±0.00 3.915±3.32 4.575±0.00 8.497±0.00 6.253±5.81 4.210±0.00 1.812±1.50 N/A N/A N/A 6.072±3.40
ENST00000567695 7.381±0.00 7.008±0.00 13.911±10.44 4.568±0.00 6.681±0.00 7.522±7.15 6.232±5.63 4.464±0.00 N/A 1.751±0.00 15.904±4.11 8.344±1.40 8.116±0.00
ENST00000588381 N/A N/A N/A N/A N/A 0.949±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000589159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.749±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000TZ CIL_0000TZ_0001 CGP 16:4474690-4538828
CIL_000108 CIL_000108_0001 CGP 16:4510675-4600714

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 NAS nucleus
GO:0006915 IGI apoptotic process
GO:0033209 IGI tumor necrosis factor-mediated signaling pathway
GO:0042771 IMP intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076118 CDIP1 cell death-inducing p53 target 1 protein_coding Danio_rerio
ENSMUSG00000004071 Cdip1 cell death inducing Trp53 target 1 protein_coding Mus_musculus

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