C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glucosidase, alpha; neutral AB
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000089597 GANAB 9606 - 11:62624826-62646726 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000346178 GANAB-002 62624826-62646615 protein_coding
  ENST00000356638 GANAB-001 62625059-62646616 protein_coding
  ENST00000524437 GANAB-009 62634571-62639471 retained_intron
  ENST00000525994 GANAB-011 62633442-62646632 protein_coding
  ENST00000526210 GANAB-012 62634753-62646613 nonsense_mediated_decay
  ENST00000526392 GANAB-010 62634789-62646606 retained_intron
  ENST00000526732 GANAB-007 62632593-62633930 retained_intron
  ENST00000528503 GANAB-013 62625731-62626770 retained_intron
  ENST00000529737 GANAB-016 62634824-62646623 nonsense_mediated_decay
  ENST00000531563 GANAB-014 62626400-62627111 retained_intron
  ENST00000532402 GANAB-004 62624826-62646602 nonsense_mediated_decay
  ENST00000534419 GANAB-005 62634896-62646617 processed_transcript
  ENST00000534422 GANAB-008 62633028-62639467 processed_transcript
  ENST00000534613 GANAB-015 62633057-62646616 nonsense_mediated_decay
  ENST00000534779 GANAB-003 62625781-62646632 protein_coding
  ENST00000540933 GANAB-201 62624832-62646726 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000346178ENST00000356638ENST00000532402ENST00000534779
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000346178 N/A N/A 2.038±0.00 2.536±1.67 3.632±0.00 3.077±0.00 4.658±3.00 12.208±1.41 2.649±0.00 6.873±3.08 N/A 20.669±9.30 40.312±8.64 10.754±0.52
ENST00000356638 61.118±0.00 50.860±0.00 7.745±0.00 13.002±9.00 28.904±18.31 25.616±12.39 14.661±12.19 31.366±17.29 31.809±21.27 26.823±19.53 13.572±10.51 26.538±22.17 44.999±8.87 33.072±15.66
ENST00000532402 N/A N/A N/A 1.417±0.00 5.424±0.00 N/A N/A N/A N/A N/A N/A 27.583±10.01 25.841±8.63 15.665±0.00
ENST00000534779 N/A N/A 2.815±0.00 N/A N/A N/A N/A N/A N/A N/A 1.561±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089X CIL_00089X_0001 VISTA 11:62298635-62900076
CIL_0005IC CIL_0005IC_0002 CGP 11:62624826-62653302

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004553 IEA hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005515 IEA protein binding
GO:0005788 TAS endoplasmic reticulum lumen
GO:0005794 IEA Golgi apparatus
GO:0005975 IEA carbohydrate metabolic process
GO:0006457 TAS protein folding
GO:0016020 IDA membrane
GO:0017177 IEA glucosidase II complex
GO:0018279 TAS protein N-linked glycosylation via asparagine
GO:0030246 IEA carbohydrate binding
GO:0033919 IEA glucan 1,3-alpha-glucosidase activity
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076811 GANAB (1 of 3) glucosidase, alpha; neutral AB protein_coding Danio_rerio
ENSDARG00000076888 GANAB (2 of 3) glucosidase, alpha; neutral AB protein_coding Danio_rerio
ENSDARG00000079701 GANAB (3 of 3) glucosidase, alpha; neutral AB protein_coding Danio_rerio
ENSMUSG00000071650 Ganab alpha glucosidase 2 alpha neutral subunit protein_coding Mus_musculus

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