C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: golgi glycoprotein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000090863 GLG1 9606 - 16:74451958-74607114 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000205061 GLG1-001 74451958-74607114 protein_coding
  ENST00000422840 GLG1-002 74451959-74607094 protein_coding
  ENST00000447066 GLG1-003 74452027-74607112 protein_coding
  ENST00000561481 GLG1-006 74461489-74468405 retained_intron
  ENST00000561942 GLG1-013 74453189-74458294 retained_intron
  ENST00000562090 GLG1-004 74452790-74607105 nonsense_mediated_decay
  ENST00000563432 GLG1-011 74467759-74472492 retained_intron
  ENST00000563646 GLG1-012 74461784-74463439 retained_intron
  ENST00000565260 GLG1-008 74503736-74607097 protein_coding
  ENST00000565474 GLG1-009 74496600-74563325 protein_coding
  ENST00000566601 GLG1-005 74468254-74472950 retained_intron
  ENST00000567911 GLG1-010 74474172-74477533 retained_intron
  ENST00000567951 GLG1-007 74452790-74607098 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000205061ENST00000422840ENST00000447066ENST00000567951
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000205061 N/A N/A 4.659±0.00 8.194±0.00 7.808±0.00 N/A 4.563±0.00 N/A N/A 2.852±0.00 N/A 4.749±0.00 N/A 14.197±0.00
ENST00000422840 39.827±0.00 29.816±0.00 N/A 14.239±8.83 15.605±7.76 29.561±0.00 8.802±5.12 17.100±13.05 5.644±2.14 16.451±10.79 22.218±0.00 23.494±16.02 40.506±4.65 26.516±12.16
ENST00000447066 N/A N/A N/A N/A N/A 7.075±0.00 N/A N/A N/A N/A N/A 5.693±0.49 8.067±0.00 19.730±0.00
ENST00000567951 N/A N/A 3.447±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090U CIL_00090U_0001 VISTA 16:73974670-74575347
CIL_0002I2 CIL_0002I2_0001 CGP 16:74451958-74666881

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 IEA Golgi membrane
GO:0005102 TAS receptor binding
GO:0005794 IDA Golgi apparatus
GO:0005886 TAS plasma membrane
GO:0007596 TAS blood coagulation
GO:0010955 IEA negative regulation of protein processing
GO:0016020 IDA:IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030512 IEA negative regulation of transforming growth factor beta receptor signaling pathway
GO:0031012 IEA extracellular matrix
GO:0032330 IEA regulation of chondrocyte differentiation
GO:0050900 TAS leukocyte migration
GO:0060349 IEA bone morphogenesis
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013780 glg1b golgi glycoprotein 1b protein_coding Danio_rerio
ENSDARG00000061282 glg1a golgi glycoprotein 1a protein_coding Danio_rerio
ENSMUSG00000003316 Glg1 golgi apparatus protein 1 protein_coding Mus_musculus

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