C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: laminin, beta 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000091128 LAMB4 9606 - 7:108023548-108130356 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000205386 LAMB4-001 108023548-108130355 protein_coding
  ENST00000388781 LAMB4-201 108023551-108130356 protein_coding
  ENST00000418464 LAMB4-003 108075537-108130355 protein_coding
  ENST00000422975 LAMB4-004 108026561-108063899 protein_coding
  ENST00000471677 LAMB4-005 108062397-108065858 retained_intron
  ENST00000475469 LAMB4-002 108062470-108130356 retained_intron
  ENST00000475572 LAMB4-006 108030945-108044270 processed_transcript
  ENST00000483484 LAMB4-007 108023811-108037462 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000205386ENST00000388781ENST00000418464ENST00000422975ENST00000471677ENST00000475469ENST00000475572ENST00000483484
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000205386 N/A N/A N/A N/A N/A 0.004±0.00 N/A 0.077±0.00 N/A N/A N/A N/A 1.909±0.97 N/A
ENST00000388781 N/A N/A N/A N/A N/A 0.004±0.00 N/A 0.066±0.00 N/A N/A N/A N/A N/A N/A
ENST00000418464 0.047±0.00 0.109±0.00 0.098±0.00 0.007±0.00 0.017±0.00 0.074±0.00 0.068±0.02 0.046±0.00 0.026±0.00 0.022±0.00 0.005±0.00 0.024±0.01 N/A N/A
ENST00000422975 N/A 0.020±0.00 0.113±0.00 0.029±0.00 0.024±0.00 N/A 0.023±0.00 N/A 0.051±0.00 N/A N/A 0.016±0.00 N/A 0.488±0.32
ENST00000471677 0.086±0.00 N/A 0.341±0.00 N/A N/A N/A 0.138±0.00 0.508±0.00 N/A N/A N/A 0.024±0.00 N/A N/A
ENST00000475469 N/A N/A N/A N/A 0.027±0.00 N/A N/A N/A N/A N/A N/A 0.016±0.00 N/A N/A
ENST00000475572 N/A N/A N/A N/A N/A 0.133±0.00 N/A N/A N/A N/A N/A 0.050±0.00 N/A 0.320±0.00
ENST00000483484 0.030±0.00 N/A N/A N/A N/A N/A 0.082±0.00 N/A N/A N/A N/A 0.018±0.00 2.569±0.00 0.282±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ZV CIL_0008ZV_0001 VISTA 7:107646717-108248447
CIL_00063H CIL_00063H_0002 CGP 7:107923799-108130356

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005604 IEA basement membrane
GO:0007155 IEA cell adhesion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039133 lamb4 laminin, beta 4 protein_coding Danio_rerio

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