C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sel-1 suppressor of lin-12-like 3 (C. elegans)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000091490 SEL1L3 9606 - 4:25747427-25863760 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000264868 SEL1L3-001 25747433-25863595 protein_coding
  ENST00000399878 SEL1L3-003 25747427-25862959 protein_coding
  ENST00000502949 SEL1L3-002 25748266-25863537 protein_coding
  ENST00000507618 SEL1L3-012 25757534-25767772 protein_coding
  ENST00000509290 SEL1L3-011 25767584-25776719 retained_intron
  ENST00000510448 SEL1L3-006 25755922-25765360 protein_coding
  ENST00000510880 SEL1L3-010 25847343-25860631 protein_coding
  ENST00000512286 SEL1L3-013 25748064-25757852 retained_intron
  ENST00000513364 SEL1L3-009 25833063-25862988 processed_transcript
  ENST00000513416 SEL1L3-005 25747434-25759977 retained_intron
  ENST00000513691 SEL1L3-008 25847382-25863742 protein_coding
  ENST00000514321 SEL1L3-014 25777616-25779203 protein_coding
  ENST00000514872 SEL1L3-007 25847461-25863760 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000264868ENST00000399878ENST00000502949ENST00000507618ENST00000510448ENST00000513416
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000264868 N/A N/A 0.461±0.00 N/A N/A N/A N/A 0.785±0.00 0.991±0.00 1.988±0.00 0.110±0.00 N/A N/A N/A
ENST00000399878 0.617±0.00 38.037±0.00 0.969±0.00 1.472±0.00 2.015±0.97 1.703±0.00 0.165±0.00 4.982±0.00 1.105±0.67 8.575±5.01 N/A 8.736±8.81 17.613±15.86 3.218±0.00
ENST00000502949 N/A N/A N/A N/A N/A N/A 0.287±0.00 2.645±0.00 1.036±0.30 N/A 0.134±0.00 2.548±0.55 4.058±0.69 N/A
ENST00000507618 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.560±0.00 N/A N/A N/A
ENST00000510448 N/A N/A N/A N/A N/A 7.901±0.00 N/A 1.432±0.00 N/A N/A N/A N/A N/A N/A
ENST00000513416 N/A N/A N/A N/A N/A N/A 0.144±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000342 CIL_000342_0002 CGP 4:25655301-25863760
CIL_00079P CIL_00079P_0001 CGP 4:25747427-25929874

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089049 CABZ01079870.1 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000029189 Sel1l3 sel-1 suppressor of lin-12-like 3 (C. elegans) protein_coding Mus_musculus

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