C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: HECT domain containing E3 ubiquitin protein ligase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000092148 HECTD1 9606 - 14:31100112-31207804 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000399332 HECTD1-201 31100118-31207483 protein_coding
  ENST00000553616 HECTD1-009 31178065-31206176 retained_intron
  ENST00000553700 HECTD1-001 31100118-31207804 protein_coding
  ENST00000553957 HECTD1-005 31113140-31168341 protein_coding
  ENST00000554027 HECTD1-014 31116321-31121643 retained_intron
  ENST00000554471 HECTD1-010 31172954-31174974 protein_coding
  ENST00000554850 HECTD1-011 31135542-31136838 retained_intron
  ENST00000554882 HECTD1-006 31100112-31127868 protein_coding
  ENST00000555311 HECTD1-018 31109124-31112443 retained_intron
  ENST00000555843 HECTD1-007 31100118-31123670 retained_intron
  ENST00000555915 HECTD1-013 31119770-31128701 nonsense_mediated_decay
  ENST00000556004 HECTD1-017 31127519-31128718 retained_intron
  ENST00000556224 HECTD1-003 31144111-31207483 protein_coding
  ENST00000556281 HECTD1-019 31100597-31101392 retained_intron
  ENST00000556474 HECTD1-004 31203071-31207709 processed_transcript
  ENST00000557321 HECTD1-015 31113431-31114393 retained_intron
  ENST00000557369 HECTD1-012 31127866-31134940 protein_coding
  ENST00000557695 HECTD1-016 31102788-31105627 retained_intron
  ENST00000611816 HECTD1-202 31100118-31207317 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000399332ENST00000553700ENST00000553957ENST00000554882ENST00000556224
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000399332 3.518±0.00 N/A 5.113±0.00 4.940±1.57 2.434±0.00 1.598±0.00 4.961±1.13 3.710±0.00 7.569±5.99 1.907±0.00 10.899±4.18 4.580±2.28 2.215±0.80 3.815±0.17
ENST00000553700 4.846±0.00 2.656±0.00 N/A 4.606±0.20 6.067±2.67 3.296±0.00 3.728±0.76 5.785±0.78 1.999±0.00 9.099±6.84 14.854±6.69 5.734±3.54 2.208±0.00 4.680±0.19
ENST00000553957 N/A N/A 4.073±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 9.878±0.00 N/A N/A
ENST00000554882 11.087±0.00 8.463±0.00 N/A 10.722±0.00 11.944±0.00 9.317±0.00 7.763±0.00 18.177±0.00 11.533±0.00 10.053±0.00 57.695±0.00 22.875±8.56 11.405±5.47 25.202±2.05
ENST00000556224 N/A N/A N/A N/A 12.830±0.00 15.073±0.00 N/A 8.694±0.00 N/A N/A N/A 16.153±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004EG CIL_0004EG_0001 CGP 14:31025106-31207804
CIL_0004EH CIL_0004EH_0001 CGP 14:31100112-31420582

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001843 IEA neural tube closure
GO:0004842 IBA:IEA ubiquitin-protein transferase activity
GO:0005488 IEA binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IBA nucleus
GO:0005737 IBA cytoplasm
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0042787 IBA protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054213 hectd1 HECT domain containing 1 protein_coding Danio_rerio
ENSMUSG00000035247 Hectd1 HECT domain containing 1 protein_coding Mus_musculus

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