C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000095564 BTAF1 9606 + 10:91923769-92030325 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000265990 BTAF1-001 91923769-92030325 protein_coding
  ENST00000471217 BTAF1-002 91956621-91989395 processed_transcript
  ENST00000476401 BTAF1-003 91980520-91982415 processed_transcript
  ENST00000544642 BTAF1-201 91935152-92030321 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000265990ENST00000471217ENST00000544642
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000265990 N/A 0.829±0.00 N/A 1.404±0.00 1.650±0.06 1.358±0.00 1.259±0.00 1.123±0.00 N/A 2.730±0.55 0.796±0.00 1.661±0.65 1.200±0.00 3.349±0.00
ENST00000471217 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.963±0.00 N/A N/A
ENST00000544642 1.269±0.00 1.693±0.00 1.068±0.00 0.993±0.00 2.578±0.00 3.212±0.00 1.244±0.00 N/A 3.116±2.35 2.627±0.00 0.679±0.00 2.373±1.03 0.778±0.63 1.287±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00018S CIL_00018S_0001 CGP 10:91906589-92030325
CIL_00018R CIL_00018R_0001 CGP 10:91923769-92291087

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 NAS sequence-specific DNA binding transcription factor activity
GO:0004386 IEA helicase activity
GO:0005488 IEA binding
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0008152 IEA metabolic process
GO:0035562 IMP negative regulation of chromatin binding
GO:0045892 NAS negative regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060089 btaf1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated protein_coding Danio_rerio
ENSMUSG00000040565 Btaf1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, (Mot1 homolog, S. cerevisiae) protein_coding Mus_musculus

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