C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mitochondrial ribosomal protein S18A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000096080 MRPS18A 9606 - 6:43671303-43687791 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000372116 MRPS18A-001 43671510-43687791 protein_coding
  ENST00000372133 MRPS18A-003 43671303-43687791 protein_coding
  ENST00000427312 MRPS18A-002 43671784-43687791 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372116ENST00000372133ENST00000427312
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372116 8.521±0.00 8.943±0.00 1.013±0.00 6.705±3.81 6.897±3.73 6.533±3.02 3.452±0.39 5.342±3.21 2.737±0.00 2.907±2.19 10.832±1.98 19.229±12.27 18.067±0.00 11.091±0.00
ENST00000372133 12.452±0.00 16.590±0.00 0.363±0.00 9.540±1.56 9.057±5.09 5.105±4.46 9.448±5.20 13.080±8.03 15.217±14.47 8.502±5.72 21.140±7.34 17.260±10.24 30.082±19.21 12.327±0.00
ENST00000427312 N/A N/A 2.478±0.00 N/A N/A N/A N/A N/A 3.297±0.00 0.891±0.00 N/A 5.717±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YI CIL_0008YI_0001 VISTA 6:43493027-44094540

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005739 IEA mitochondrion
GO:0005763 IDA mitochondrial small ribosomal subunit
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000024465 mrps18a mitochondrial ribosomal protein S18A protein_coding Danio_rerio
ENSMUSG00000023967 Mrps18a mitochondrial ribosomal protein S18A protein_coding Mus_musculus

Loading