C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: progastricsin (pepsinogen C)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000096088 PGC 9606 - 6:41736711-41754109 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000356667 PGC-003 41740602-41747395 protein_coding
  ENST00000373025 PGC-001 41736711-41747397 protein_coding
  ENST00000415707 PGC-004 41744479-41754109 protein_coding
  ENST00000425343 PGC-201 41740838-41747401 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000356667ENST00000373025ENST00000415707ENST00000425343
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000356667 N/A N/A N/A N/A N/A 0.105±0.00 N/A N/A N/A N/A N/A
ENST00000373025 0.431±0.00 N/A 0.090±0.00 N/A N/A 0.054±0.00 0.204±0.00 44.600±0.93 0.323±0.20 0.270±0.16 0.257±0.03
ENST00000415707 N/A 0.142±0.00 N/A N/A 0.880±0.00 N/A 0.127±0.00 N/A 0.118±0.00 N/A N/A
ENST00000425343 N/A N/A N/A 0.097±0.00 0.237±0.00 0.075±0.00 N/A N/A 0.045±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QG CIL_0007QG_0001 VISTA 6:41166717-41767957
CIL_0008IB CIL_0008IB_0001 VISTA 6:41169077-41770286
CIL_0008XI CIL_0008XI_0001 VISTA 6:41187113-41790491
CIL_00093V CIL_00093V_0001 VISTA 6:41255486-41855939
CIL_000963 CIL_000963_0001 VISTA 6:41292979-41894337

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004190 IEA aspartic-type endopeptidase activity
GO:0005615 TAS extracellular space
GO:0006508 IEA proteolysis
GO:0007586 IEA digestion
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000052792 nots nothepsin protein_coding Danio_rerio
ENSMUSG00000023987 Pgc progastricsin (pepsinogen C) protein_coding Mus_musculus

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