C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 21, member A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000099290 FAM21A 9606 + 10:50067888-50133509 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000282633 FAM21A-005 50067961-50133146 protein_coding
  ENST00000314664 FAM21A-201 50067888-50133506 protein_coding
  ENST00000351071 FAM21A-202 50067888-50133506 protein_coding
  ENST00000399339 FAM21A-203 50078126-50133509 protein_coding
  ENST00000434114 FAM21A-001 50067924-50133502 nonsense_mediated_decay
  ENST00000454806 FAM21A-002 50119650-50126508 protein_coding
  ENST00000476514 FAM21A-004 50080876-50085619 processed_transcript
  ENST00000492914 FAM21A-003 50069510-50091505 processed_transcript
  ENST00000611324 FAM21A-204 50067888-50133506 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000282633ENST00000314664ENST00000351071ENST00000399339ENST00000434114ENST00000492914ENST00000611324
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000282633 N/A N/A N/A N/A 2.314±0.00 N/A 0.686±0.00 N/A N/A 2.479±0.00 N/A 1.703±0.00 N/A N/A
ENST00000314664 N/A 0.335±0.00 0.237±0.00 N/A N/A 0.737±0.00 0.293±0.00 N/A N/A N/A 0.613±0.00 N/A 0.475±0.00 0.573±0.00
ENST00000351071 N/A N/A 0.865±0.00 0.970±0.00 0.609±0.00 N/A N/A N/A 0.353±0.00 N/A N/A N/A 1.037±0.00 N/A
ENST00000399339 N/A N/A N/A 0.332±0.00 N/A N/A N/A N/A N/A N/A N/A 1.257±0.00 0.862±0.06 N/A
ENST00000434114 0.559±0.00 0.536±0.00 N/A 0.458±0.00 N/A 0.582±0.00 N/A 0.743±0.00 N/A 0.784±0.34 0.259±0.00 N/A N/A 0.676±0.00
ENST00000492914 N/A N/A 3.965±0.00 3.238±0.00 N/A N/A 2.841±0.00 2.062±0.00 4.756±0.00 3.790±0.00 N/A 3.781±0.25 2.957±0.00 2.390±0.00
ENST00000611324 2.360±0.00 2.145±0.00 N/A 2.672±0.00 2.348±0.00 0.956±0.00 1.984±1.71 1.713±1.36 0.709±0.06 2.036±0.00 2.142±0.00 2.761±1.40 2.262±0.84 2.209±0.77

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005769 ISS early endosome
GO:0016020 IEA membrane
GO:0042147 ISS retrograde transport, endosome to Golgi
GO:0071203 ISS WASH complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062532 fam21c family with sequence similarity 21, member C protein_coding Danio_rerio
ENSMUSG00000024104 Fam21 family with sequence similarity 21 protein_coding Mus_musculus

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