C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: trans-2,3-enoyl-CoA reductase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000099797 TECR 9606 + 19:14517085-14565980 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000215567 TECR-001 14529560-14565978 protein_coding
  ENST00000593637 TECR-015 14529610-14565258 retained_intron
  ENST00000593775 TECR-023 14564698-14565975 retained_intron
  ENST00000594545 TECR-011 14561967-14564981 protein_coding
  ENST00000594807 TECR-008 14529630-14564119 retained_intron
  ENST00000594958 TECR-024 14564961-14565961 retained_intron
  ENST00000596073 TECR-002 14529592-14565977 protein_coding
  ENST00000596164 TECR-013 14529697-14563884 processed_transcript
  ENST00000596953 TECR-016 14529641-14565283 retained_intron
  ENST00000597607 TECR-017 14529657-14565978 retained_intron
  ENST00000598298 TECR-007 14529579-14564992 protein_coding
  ENST00000598333 TECR-018 14529636-14565660 nonsense_mediated_decay
  ENST00000598408 TECR-025 14564942-14565980 retained_intron
  ENST00000598715 TECR-009 14545724-14564073 protein_coding
  ENST00000598918 TECR-010 14545759-14563814 nonsense_mediated_decay
  ENST00000598987 TECR-004 14529595-14565977 nonsense_mediated_decay
  ENST00000599101 TECR-022 14564694-14565925 retained_intron
  ENST00000599646 TECR-005 14529630-14532528 retained_intron
  ENST00000600076 TECR-006 14517085-14563738 retained_intron
  ENST00000600083 TECR-003 14529594-14565980 protein_coding
  ENST00000600395 TECR-019 14564058-14565971 retained_intron
  ENST00000601187 TECR-021 14564229-14565977 protein_coding
  ENST00000601350 TECR-020 14564252-14565921 retained_intron
  ENST00000601461 TECR-012 14562052-14565040 retained_intron
  ENST00000601652 TECR-014 14529598-14563526 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000215567ENST00000597607ENST00000598333
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000215567 46.656±0.00 59.102±0.00 44.471±36.92 121.787±0.00 6.166±0.00 9.595±6.48 35.873±24.88 50.349±0.00 94.099±0.00 114.299±48.92 121.307±35.46 173.123±10.18
ENST00000597607 N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.557±0.00 N/A N/A
ENST00000598333 28.687±0.00 N/A 84.925±0.00 N/A N/A 15.487±0.00 N/A N/A 84.342±0.00 N/A 96.110±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000179 CIL_000179_0002 CGP 19:14477760-14529770
CIL_0004DU CIL_0004DU_0002 CGP 19:14514770-14565980
CIL_0004DV CIL_0004DV_0002 CGP 19:14517085-14572062

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0005783 IDA endoplasmic reticulum
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006629 IEA lipid metabolic process
GO:0016021 IEA integral component of membrane
GO:0016627 IEA oxidoreductase activity, acting on the CH-CH group of donors
GO:0019432 TAS triglyceride biosynthetic process
GO:0030176 IDA integral component of endoplasmic reticulum membrane
GO:0030497 IDA fatty acid elongation
GO:0035338 TAS long-chain fatty-acyl-CoA biosynthetic process
GO:0042761 IDA very long-chain fatty acid biosynthetic process
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000025904 tecrb trans-2,3-enoyl-CoA reductase b protein_coding Danio_rerio
ENSDARG00000070956 tecra trans-2,3-enoyl-CoA reductase a protein_coding Danio_rerio
ENSMUSG00000031708 Tecr trans-2,3-enoyl-CoA reductase protein_coding Mus_musculus

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