C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: methylthioadenosine phosphorylase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000099810 MTAP 9606 + 9:21802543-21937651 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000380172 MTAP-001 21802543-21867078 protein_coding
  ENST00000419385 MTAP-006 21802657-21863286 nonsense_mediated_decay
  ENST00000427788 MTAP-013 21803278-21837927 processed_transcript
  ENST00000460874 MTAP-003 21802642-21862320 protein_coding
  ENST00000484957 MTAP-004 21859323-21862220 processed_transcript
  ENST00000577563 MTAP-009 21854724-21931199 protein_coding
  ENST00000579422 MTAP-012 21802961-21818045 processed_transcript
  ENST00000580675 MTAP-011 21802647-21815607 retained_intron
  ENST00000580718 MTAP-007 21802662-21862367 nonsense_mediated_decay
  ENST00000580900 MTAP-008 21802649-21937651 protein_coding
  ENST00000581962 MTAP-015 21859220-21862092 retained_intron
  ENST00000584988 MTAP-014 21856118-21862357 processed_transcript
  ENST00000616982 MTAP-010 21930390-21932739 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000380172ENST00000419385ENST00000460874ENST00000580718ENST00000580900ENST00000584988
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000380172 1.530±0.00 0.865±0.00 0.809±0.00 1.190±0.00 1.046±0.48 1.239±0.06 0.421±0.05 1.268±0.32 1.646±0.61 0.461±0.00 0.275±0.00 2.280±0.15 1.480±0.07 0.953±0.43
ENST00000419385 1.928±0.00 1.940±0.00 1.482±0.00 1.678±0.00 2.038±0.00 1.867±0.16 0.661±0.20 1.206±0.33 1.883±0.82 1.672±0.44 0.608±0.00 4.778±2.23 2.825±1.07 1.425±0.00
ENST00000460874 N/A N/A N/A N/A 2.830±0.00 N/A N/A 1.541±0.00 N/A N/A N/A N/A 3.628±0.58 3.349±0.00
ENST00000580718 N/A N/A N/A N/A N/A N/A N/A N/A 2.074±0.00 N/A N/A N/A N/A N/A
ENST00000580900 1.199±0.00 1.022±0.00 N/A 0.299±0.00 1.369±0.00 0.530±0.00 0.211±0.06 0.445±0.16 0.631±0.21 0.548±0.06 0.376±0.00 0.981±0.28 0.638±0.12 0.439±0.00
ENST00000584988 N/A N/A N/A N/A N/A N/A 1.799±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00074E CIL_00074E_0001 CGP 9:21480839-21937651
CIL_0007YE CIL_0007YE_0001 VISTA 9:21773412-22380489
CIL_0007U7 CIL_0007U7_0001 VISTA 9:21778886-22382106
CIL_0007YH CIL_0007YH_0001 VISTA 9:21779916-22382548
CIL_0007YG CIL_0007YG_0001 VISTA 9:21783894-22389830
CIL_0007U8 CIL_0007U8_0001 VISTA 9:21787553-22389799
CIL_00095D CIL_00095D_0001 VISTA 9:21788649-22389830
CIL_000945 CIL_000945_0001 VISTA 9:21789705-22397955
CIL_0008WE CIL_0008WE_0001 VISTA 9:21797850-22401302
CIL_0007YC CIL_0007YC_0001 VISTA 9:21801286-22408086

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000096 TAS sulfur amino acid metabolic process
GO:0003824 IEA catalytic activity
GO:0004645 IEA phosphorylase activity
GO:0004731 IEA purine-nucleoside phosphorylase activity
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0006139 TAS nucleobase-containing compound metabolic process
GO:0006166 IEA purine ribonucleoside salvage
GO:0006595 TAS polyamine metabolic process
GO:0009116 IEA nucleoside metabolic process
GO:0017061 TAS:IEA S-methyl-5-thioadenosine phosphorylase activity
GO:0019509 IEA L-methionine biosynthetic process from methylthioadenosine
GO:0032259 IEA methylation
GO:0033574 IEA response to testosterone
GO:0034641 TAS cellular nitrogen compound metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037261 mtap methylthioadenosine phosphorylase protein_coding Danio_rerio
ENSMUSG00000062937 Mtap methylthioadenosine phosphorylase protein_coding Mus_musculus

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