C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TBC1 domain family, member 10A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000099992 TBC1D10A 9606 - 22:30291990-30327046 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000215790 TBC1D10A-001 30291990-30327046 protein_coding
  ENST00000393906 TBC1D10A-014 30294089-30305631 protein_coding
  ENST00000403362 TBC1D10A-003 30292008-30307890 protein_coding
  ENST00000403477 TBC1D10A-002 30291993-30326901 protein_coding
  ENST00000433426 TBC1D10A-013 30292010-30318835 nonsense_mediated_decay
  ENST00000437122 TBC1D10A-011 30293921-30326947 nonsense_mediated_decay
  ENST00000462073 TBC1D10A-004 30291991-30299796 retained_intron
  ENST00000466666 TBC1D10A-015 30293399-30294849 retained_intron
  ENST00000467596 TBC1D10A-009 30291991-30297480 retained_intron
  ENST00000490449 TBC1D10A-012 30300471-30326901 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000215790ENST00000393906ENST00000403477ENST00000433426ENST00000437122ENST00000462073ENST00000466666ENST00000467596ENST00000490449
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000215790 20.241±0.00 14.458±0.00 6.255±0.00 13.289±0.00 3.904±3.57 1.381±1.22 8.946±8.28 2.263±1.84 19.123±0.00 N/A 13.988±6.36 28.437±11.03 17.840±2.18
ENST00000393906 N/A N/A N/A 1.024±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000403477 N/A N/A N/A N/A 4.067±0.00 1.497±0.00 N/A N/A 12.406±0.00 0.735±0.00 0.317±0.00 N/A N/A
ENST00000433426 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.033±0.00 N/A N/A N/A
ENST00000437122 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.690±0.00 N/A N/A N/A
ENST00000462073 N/A N/A N/A N/A 0.150±0.00 N/A N/A N/A 0.386±0.00 N/A 0.126±0.00 N/A N/A
ENST00000466666 N/A N/A N/A 1.986±0.00 N/A N/A N/A N/A N/A N/A 1.912±0.00 N/A N/A
ENST00000467596 N/A N/A N/A 0.203±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490449 N/A N/A N/A N/A 1.204±0.00 N/A 2.170±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005085 IEA guanyl-nucleotide exchange factor activity
GO:0005097 IEA Rab GTPase activator activity
GO:0005515 IPI protein binding
GO:0005886 IDA plasma membrane
GO:0005902 TAS microvillus
GO:0030165 IPI PDZ domain binding
GO:0032313 IEA regulation of Rab GTPase activity
GO:0032851 IEA positive regulation of Rab GTPase activity
GO:0042147 IMP retrograde transport, endosome to Golgi
GO:0045862 IDA positive regulation of proteolysis
GO:0070062 IDA extracellular vesicular exosome
GO:0097202 IDA activation of cysteine-type endopeptidase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060096 tbc1d10a TBC1 domain family, member 10A protein_coding Danio_rerio
ENSDARG00000077871 si:ch211-87l2.1 si:ch211-87l2.1 protein_coding Danio_rerio
ENSMUSG00000034412 Tbc1d10a TBC1 domain family, member 10a protein_coding Mus_musculus

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