C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SEC14-like 2 (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100003 SEC14L2 9606 + 22:30396857-30425317 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000402592 SEC14L2-027 30397045-30422601 protein_coding
  ENST00000405717 SEC14L2-004 30397037-30416975 protein_coding
  ENST00000415072 SEC14L2-022 30398577-30407477 protein_coding
  ENST00000416523 SEC14L2-018 30397018-30409136 processed_transcript
  ENST00000428195 SEC14L2-016 30396941-30415865 protein_coding
  ENST00000429917 SEC14L2-021 30397538-30407542 protein_coding
  ENST00000437022 SEC14L2-019 30397018-30409249 nonsense_mediated_decay
  ENST00000452649 SEC14L2-017 30397018-30409477 nonsense_mediated_decay
  ENST00000459728 SEC14L2-025 30397051-30409282 processed_transcript
  ENST00000464335 SEC14L2-006 30399684-30416673 retained_intron
  ENST00000483116 SEC14L2-023 30409022-30416007 retained_intron
  ENST00000484486 SEC14L2-015 30399684-30400467 processed_transcript
  ENST00000485482 SEC14L2-005 30399684-30400467 processed_transcript
  ENST00000615189 SEC14L2-001 30396857-30425317 protein_coding
  ENST00000617837 SEC14L2-003 30396992-30423838 protein_coding
  ENST00000619483 SEC14L2-002 30396995-30423840 retained_intron
  ENST00000620251 SEC14L2-007 30409115-30423838 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000402592ENST00000405717ENST00000416523ENST00000428195ENST00000483116ENST00000615189ENST00000617837ENST00000619483ENST00000620251
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000402592 N/A N/A N/A 2.657±0.00 N/A N/A 0.135±0.00 17.565±0.00 N/A N/A N/A 1.187±0.00 N/A
ENST00000405717 N/A N/A N/A 1.600±0.00 0.783±0.00 0.654±0.00 0.138±0.00 N/A N/A 1.384±0.00 N/A N/A 0.420±0.00
ENST00000416523 N/A N/A N/A N/A N/A N/A N/A 64.140±0.00 N/A N/A N/A N/A N/A
ENST00000428195 N/A N/A N/A 6.253±0.00 N/A N/A N/A 28.808±0.00 N/A N/A N/A N/A N/A
ENST00000483116 N/A N/A N/A N/A N/A 1.890±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000615189 N/A N/A N/A 3.930±3.10 N/A N/A N/A 4.575±0.00 10.370±0.00 N/A N/A 0.537±0.00 0.799±0.51
ENST00000617837 N/A 1.346±0.00 0.727±0.00 16.647±0.00 1.303±0.71 0.533±0.00 N/A 4.971±3.13 9.861±9.56 0.773±0.00 N/A 1.351±0.44 N/A
ENST00000619483 N/A N/A N/A 6.556±0.00 1.060±0.00 0.233±0.00 N/A N/A N/A 1.200±0.00 N/A N/A N/A
ENST00000620251 1.394±0.00 N/A 2.126±0.00 N/A N/A 0.321±0.00 N/A N/A N/A N/A 0.208±0.00 N/A 2.812±2.34

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005543 NAS phospholipid binding
GO:0005622 IEA intracellular
GO:0005634 NAS nucleus
GO:0005737 NAS cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006810 IEA transport
GO:0008431 NAS vitamin E binding
GO:0016021 IEA integral component of membrane
GO:0045540 NAS regulation of cholesterol biosynthetic process
GO:0045893 NAS positive regulation of transcription, DNA-templated
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059729 si:ch211-89f7.1 si:ch211-89f7.1 protein_coding Danio_rerio
ENSDARG00000074570 FP016199.1 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000003585 Sec14l2 SEC14-like 2 (S. cerevisiae) protein_coding Mus_musculus

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