C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cytohesin 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100055 CYTH4 9606 + 22:37282027-37315345 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000248901 CYTH4-001 37282383-37315345 protein_coding
  ENST00000402997 CYTH4-008 37282475-37300173 protein_coding
  ENST00000405206 CYTH4-009 37282487-37300271 protein_coding
  ENST00000439667 CYTH4-010 37282531-37302019 processed_transcript
  ENST00000446506 CYTH4-013 37309968-37313638 protein_coding
  ENST00000447919 CYTH4-011 37300882-37303295 processed_transcript
  ENST00000457992 CYTH4-014 37282027-37297682 protein_coding
  ENST00000462927 CYTH4-002 37282525-37315341 retained_intron
  ENST00000467664 CYTH4-007 37292144-37294692 retained_intron
  ENST00000469886 CYTH4-004 37282515-37298402 retained_intron
  ENST00000480510 CYTH4-006 37282527-37296603 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000248901ENST00000405206ENST00000439667ENST00000446506ENST00000462927
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000248901 1.136±0.00 9.587±0.00 0.911±0.39 1.995±0.73 0.296±0.10 0.379±0.00 0.611±0.24 0.535±0.00 5.832±0.00 N/A 1.644±0.72 14.096±3.12 0.635±0.00
ENST00000405206 N/A N/A N/A N/A N/A N/A 2.289±0.00 1.965±0.00 2.525±0.00 N/A N/A N/A N/A
ENST00000439667 N/A N/A N/A 2.168±0.00 N/A N/A N/A N/A N/A 1.048±0.66 N/A N/A N/A
ENST00000446506 N/A N/A N/A N/A N/A N/A 0.657±0.00 N/A 2.953±0.00 0.309±0.00 N/A N/A N/A
ENST00000462927 0.430±0.00 N/A N/A 0.682±0.00 0.253±0.00 N/A N/A N/A 3.094±0.00 N/A 0.524±0.30 N/A 0.495±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000486 CIL_000486_0001 CGP 22:37225261-37315345
CIL_00040I CIL_00040I_0001 CGP 22:37282027-37427470

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005086 IEA:IBA ARF guanyl-nucleotide exchange factor activity
GO:0005886 IDA plasma membrane
GO:0008289 IEA lipid binding
GO:0030155 IBA regulation of cell adhesion
GO:0032012 IEA regulation of ARF protein signal transduction
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038011 cyth4a cytohesin 4a protein_coding Danio_rerio
ENSDARG00000039932 cyth4b cytohesin 4b protein_coding Danio_rerio
ENSMUSG00000018008 Cyth4 cytohesin 4 protein_coding Mus_musculus

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