C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: septin 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100167 SEPT3 9606 + 22:41976272-41998221 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000396417 SEPT3-002 41977050-41998066 nonsense_mediated_decay
  ENST00000396425 SEPT3-001 41976934-41998221 protein_coding
  ENST00000396426 SEPT3-003 41976810-41998221 protein_coding
  ENST00000406029 SEPT3-004 41976845-41997728 protein_coding
  ENST00000449288 SEPT3-006 41976272-41989589 protein_coding
  ENST00000460267 SEPT3-005 41985642-41987689 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000396417ENST00000396425ENST00000396426ENST00000406029ENST00000449288ENST00000460267
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000396417 0.053±0.00 0.055±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.121±0.00 N/A N/A N/A
ENST00000396425 N/A N/A 0.137±0.00 43.361±19.09 0.151±0.00 0.319±0.00 0.011±0.00 0.016±0.01 0.057±0.04 N/A N/A 0.181±0.05 4.552±1.77 1.867±1.14
ENST00000396426 0.096±0.00 N/A N/A 36.865±18.54 0.210±0.00 0.538±0.00 N/A 0.011±0.00 N/A 0.132±0.00 N/A 0.134±0.07 1.445±0.68 0.326±0.00
ENST00000406029 N/A N/A 0.104±0.00 N/A N/A N/A N/A 0.076±0.00 N/A 0.211±0.00 0.029±0.00 N/A N/A N/A
ENST00000449288 N/A N/A N/A N/A N/A 0.118±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460267 N/A N/A 0.338±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004B9 CIL_0004B9_0001 CGP 22:41976272-42058456

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0007049 IEA cell cycle
GO:0030054 IEA cell junction
GO:0031105 IEA septin complex
GO:0045202 IEA synapse
GO:0051301 IEA cell division

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000030656 sept3 septin 3 protein_coding Danio_rerio
ENSMUSG00000022456 Sept3 septin 3 protein_coding Mus_musculus

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