C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: activating signal cointegrator 1 complex subunit 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100325 ASCC2 9606 - 22:29788608-29838304 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000307790 ASCC2-001 29788608-29838274 protein_coding
  ENST00000397771 ASCC2-002 29788642-29838276 protein_coding
  ENST00000411532 ASCC2-019 29793577-29802102 protein_coding
  ENST00000412689 ASCC2-016 29821892-29832342 protein_coding
  ENST00000431535 ASCC2-010 29814657-29834550 protein_coding
  ENST00000449900 ASCC2-011 29813471-29838272 nonsense_mediated_decay
  ENST00000453160 ASCC2-004 29825108-29838261 nonsense_mediated_decay
  ENST00000454854 ASCC2-005 29825694-29838274 nonsense_mediated_decay
  ENST00000458594 ASCC2-003 29788616-29834550 nonsense_mediated_decay
  ENST00000460313 ASCC2-006 29825161-29838282 retained_intron
  ENST00000462454 ASCC2-012 29825103-29832580 retained_intron
  ENST00000463203 ASCC2-014 29822352-29825358 retained_intron
  ENST00000464287 ASCC2-018 29806836-29810288 processed_transcript
  ENST00000465667 ASCC2-015 29822142-29838228 retained_intron
  ENST00000472433 ASCC2-021 29788613-29813542 processed_transcript
  ENST00000477074 ASCC2-013 29825214-29826131 retained_intron
  ENST00000478812 ASCC2-017 29806214-29816740 processed_transcript
  ENST00000483380 ASCC2-020 29793587-29799302 processed_transcript
  ENST00000487486 ASCC2-009 29788611-29804824 retained_intron
  ENST00000492821 ASCC2-008 29834086-29838274 retained_intron
  ENST00000495681 ASCC2-007 29825087-29838274 retained_intron
  ENST00000495967 ASCC2-022 29815206-29838274 processed_transcript
  ENST00000542393 ASCC2-201 29788609-29838304 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000307790ENST00000397771ENST00000462454ENST00000487486
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000307790 4.628±0.00 6.442±0.00 N/A 0.700±0.00 4.119±2.27 10.439±0.00 3.651±3.14 6.178±0.00 5.308±0.00 3.466±0.00 11.625±10.93 7.610±3.96 12.076±1.60 21.021±0.00
ENST00000397771 10.377±0.00 3.862±0.00 0.734±0.00 2.134±0.00 5.613±4.33 2.447±0.00 2.474±0.00 2.803±0.79 4.576±3.26 3.662±1.93 6.692±0.00 5.197±3.88 7.503±0.82 11.667±4.61
ENST00000462454 N/A N/A 2.616±0.00 N/A N/A N/A 1.331±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000487486 10.682±0.00 16.291±0.00 N/A 3.015±1.59 14.979±0.00 8.620±0.00 N/A 9.931±0.00 5.356±0.00 13.950±0.00 13.716±0.00 14.549±2.67 10.567±4.01 24.700±2.86

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013058 ascc2 activating signal cointegrator 1 complex subunit 2 protein_coding Danio_rerio
ENSMUSG00000020412 Ascc2 activating signal cointegrator 1 complex subunit 2 protein_coding Mus_musculus

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