C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RNA binding motif protein 23
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100461 RBM23 9606 - 14:22900645-22919184 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000307814 RBM23-005 22902962-22919149 retained_intron
  ENST00000346528 RBM23-003 22900777-22919178 protein_coding
  ENST00000359890 RBM23-001 22900645-22919184 protein_coding
  ENST00000399922 RBM23-002 22900766-22919182 protein_coding
  ENST00000542016 RBM23-006 22901336-22919178 protein_coding
  ENST00000553738 RBM23-017 22905094-22905953 retained_intron
  ENST00000553777 RBM23-009 22917564-22919087 processed_transcript
  ENST00000553876 RBM23-015 22909483-22917556 protein_coding
  ENST00000553884 RBM23-029 22901565-22905146 protein_coding
  ENST00000553902 RBM23-014 22906015-22919149 retained_intron
  ENST00000553920 RBM23-033 22905334-22919136 processed_transcript
  ENST00000554256 RBM23-030 22905423-22919137 protein_coding
  ENST00000554618 RBM23-022 22908333-22919149 protein_coding
  ENST00000554955 RBM23-013 22906028-22919110 retained_intron
  ENST00000555209 RBM23-007 22900645-22919129 protein_coding
  ENST00000555676 RBM23-024 22906248-22919149 protein_coding
  ENST00000555691 RBM23-012 22909490-22911792 protein_coding
  ENST00000555714 RBM23-032 22905396-22919149 processed_transcript
  ENST00000555722 RBM23-027 22905158-22919165 protein_coding
  ENST00000556186 RBM23-018 22904246-22905566 retained_intron
  ENST00000556365 RBM23-011 22908532-22919149 processed_transcript
  ENST00000556687 RBM23-004 22905585-22919149 retained_intron
  ENST00000556838 RBM23-019 22901580-22902432 retained_intron
  ENST00000556862 RBM23-023 22906318-22919157 protein_coding
  ENST00000556984 RBM23-028 22906201-22919149 processed_transcript
  ENST00000557127 RBM23-016 22901818-22904084 processed_transcript
  ENST00000557227 RBM23-026 22905336-22919182 protein_coding
  ENST00000557245 RBM23-020 22901672-22902241 protein_coding
  ENST00000557403 RBM23-031 22904885-22919138 protein_coding
  ENST00000557464 RBM23-025 22906350-22919149 protein_coding
  ENST00000557549 RBM23-010 22906245-22919149 protein_coding
  ENST00000557571 RBM23-021 22906275-22919149 protein_coding
  ENST00000557667 RBM23-008 22900766-22919136 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000346528ENST00000359890ENST00000399922ENST00000542016ENST00000553876ENST00000553902ENST00000554256ENST00000554955ENST00000555209ENST00000556984ENST00000557667
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000346528 N/A N/A 3.771±0.00 2.485±0.00 N/A N/A N/A 9.129±0.00 5.016±0.00 3.704±0.00 3.151±0.28 3.925±1.60 8.275±3.43 6.072±0.00
ENST00000359890 N/A N/A N/A 1.812±0.00 N/A N/A N/A N/A N/A N/A N/A 6.722±4.95 6.509±1.85 5.547±0.00
ENST00000399922 12.700±0.00 7.920±0.00 N/A 6.815±1.72 7.003±0.72 8.237±3.09 3.222±0.74 10.324±5.59 5.721±1.50 7.169±2.25 3.025±0.00 11.326±8.83 15.282±2.93 18.489±0.00
ENST00000542016 N/A N/A 2.300±0.00 4.067±0.00 N/A 3.700±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553876 N/A N/A N/A 52.770±0.00 N/A N/A N/A N/A 80.572±0.00 74.470±0.00 N/A N/A N/A N/A
ENST00000553902 N/A N/A N/A N/A N/A N/A 10.074±0.00 N/A N/A N/A 6.505±0.00 N/A N/A N/A
ENST00000554256 N/A N/A N/A N/A N/A 5.724±0.00 N/A N/A 6.490±0.00 11.413±0.00 N/A 7.349±0.00 N/A N/A
ENST00000554955 N/A N/A 5.131±0.00 N/A 12.447±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555209 N/A 5.717±0.00 N/A 3.271±0.00 N/A 2.840±0.00 N/A 4.134±0.00 N/A 2.607±0.00 N/A 3.737±0.87 5.544±0.60 7.713±0.42
ENST00000556984 N/A N/A N/A N/A N/A N/A 3.748±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000557667 N/A 2.218±0.00 N/A N/A N/A N/A N/A N/A N/A 1.626±0.00 0.596±0.00 0.877±0.00 N/A 1.714±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006397 IEA mRNA processing
GO:0016020 IDA membrane

Homologs

No Homologs available.

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