C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ninein (GSK3B interacting protein)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100503 NIN 9606 - 14:50719763-50831121 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000245441 NIN-201 50719763-50831121 protein_coding
  ENST00000324330 NIN-202 50725833-50831121 protein_coding
  ENST00000382041 NIN-016 50725840-50831121 protein_coding
  ENST00000382043 NIN-010 50725827-50830479 protein_coding
  ENST00000389869 NIN-019 50725828-50766795 protein_coding
  ENST00000453196 NIN-203 50727236-50831121 protein_coding
  ENST00000453401 NIN-008 50770518-50831121 protein_coding
  ENST00000463419 NIN-011 50805917-50830674 retained_intron
  ENST00000474937 NIN-014 50771986-50772998 retained_intron
  ENST00000476352 NIN-003 50719817-50831046 nonsense_mediated_decay
  ENST00000480476 NIN-015 50739372-50742385 retained_intron
  ENST00000485005 NIN-009 50727689-50739388 nonsense_mediated_decay
  ENST00000486200 NIN-013 50792050-50794518 processed_transcript
  ENST00000486950 NIN-012 50792046-50821956 protein_coding
  ENST00000496749 NIN-004 50792844-50830708 protein_coding
  ENST00000530853 NIN-018 50727233-50766795 protein_coding
  ENST00000530997 NIN-017 50721497-50822056 protein_coding
  ENST00000555984 NIN-020 50723418-50726414 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000245441ENST00000324330ENST00000382043ENST00000389869ENST00000476352ENST00000530853ENST00000530997
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000245441 2.960±0.00 2.657±0.00 N/A 1.398±0.00 2.355±1.58 1.567±0.68 1.218±0.00 1.917±0.00 2.003±1.78 1.338±0.00 1.272±0.00 1.892±0.11 4.785±2.62 0.977±0.32
ENST00000324330 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.532±0.00 N/A N/A N/A 1.227±0.00
ENST00000382043 N/A N/A 0.857±0.00 1.260±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000389869 1.597±0.00 N/A N/A N/A 1.079±0.00 N/A N/A N/A 0.400±0.00 N/A N/A 1.392±0.27 N/A 1.025±0.00
ENST00000476352 N/A N/A N/A 0.889±0.18 N/A N/A N/A 0.790±0.00 0.349±0.00 0.940±0.00 0.769±0.27 N/A N/A N/A
ENST00000530853 N/A 1.733±0.00 0.902±0.00 0.667±0.00 N/A N/A N/A N/A N/A N/A N/A 0.826±0.00 0.776±0.00 N/A
ENST00000530997 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.688±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00069L CIL_00069L_0002 CGP 14:50632058-50831121
CIL_00069K CIL_00069K_0002 CGP 14:50719763-50944736

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000922 IMP spindle pole
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005730 IDA nucleolus
GO:0005813 IDA centrosome
GO:0005814 IEA centriole
GO:0005874 IEA microtubule
GO:0034454 IEA microtubule anchoring at centrosome
GO:0051642 TAS centrosome localization
GO:0090222 IEA centrosome-templated microtubule nucleation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060298 nin ninein (GSK3B interacting protein) protein_coding Danio_rerio
ENSMUSG00000021068 Nin ninein protein_coding Mus_musculus

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