C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glucosamine-phosphate N-acetyltransferase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100522 GNPNAT1 9606 - 14:52775194-52791668 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000216410 GNPNAT1-001 52775194-52791601 protein_coding
  ENST00000553987 GNPNAT1-005 52781741-52783485 retained_intron
  ENST00000554230 GNPNAT1-002 52776557-52791510 protein_coding
  ENST00000554421 GNPNAT1-004 52775864-52777081 processed_transcript
  ENST00000557604 GNPNAT1-003 52778375-52791668 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000216410ENST00000553987ENST00000554230ENST00000557604
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000216410 1.461±0.00 1.681±0.00 0.808±0.00 0.961±0.24 2.073±0.29 1.735±0.17 0.955±0.00 3.040±0.09 7.266±0.00 1.116±0.04 1.358±0.00 2.784±0.63 1.620±0.35 2.104±0.16
ENST00000553987 N/A N/A N/A 10.135±0.00 20.948±0.00 29.754±0.00 N/A 45.430±0.00 N/A N/A N/A 34.695±0.00 12.945±0.00 36.967±0.00
ENST00000554230 2.361±0.00 1.298±0.00 N/A 1.249±0.52 1.542±0.43 1.809±0.43 0.528±0.00 3.350±0.90 N/A 0.507±0.00 0.929±0.35 3.125±0.30 1.014±0.17 3.435±0.51
ENST00000557604 N/A N/A 1.131±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 15.165±0.00 5.158±0.00 12.821±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005GK CIL_0005GK_0001 CGP 14:52730180-52791668
CIL_0005GL CIL_0005GL_0001 CGP 14:52775194-52952435

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001889 IEA liver development
GO:0004343 TAS glucosamine 6-phosphate N-acetyltransferase activity
GO:0005770 IEA late endosome
GO:0005793 IEA endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 IEA Golgi apparatus
GO:0005829 TAS cytosol
GO:0006041 IEA glucosamine metabolic process
GO:0006044 IEA N-acetylglucosamine metabolic process
GO:0006048 IEA UDP-N-acetylglucosamine biosynthetic process
GO:0006488 TAS dolichol-linked oligosaccharide biosynthetic process
GO:0008080 IEA N-acetyltransferase activity
GO:0016020 IEA membrane
GO:0018279 TAS protein N-linked glycosylation via asparagine
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0048029 IEA monosaccharide binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039892 gnpnat1 glucosamine-phosphate N-acetyltransferase 1 protein_coding Danio_rerio
ENSMUSG00000037722 Gnpnat1 glucosamine-phosphate N-acetyltransferase 1 protein_coding Mus_musculus

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