C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100554 ATP6V1D 9606 - 14:67294371-67360265 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000216442 ATP6V1D-001 67338071-67360249 protein_coding
  ENST00000553408 ATP6V1D-010 67336188-67350669 protein_coding
  ENST00000553687 ATP6V1D-006 67350618-67359832 protein_coding
  ENST00000553974 ATP6V1D-012 67312005-67337776 processed_transcript
  ENST00000554087 ATP6V1D-004 67294371-67359791 nonsense_mediated_decay
  ENST00000554236 ATP6V1D-013 67338499-67359787 protein_coding
  ENST00000555012 ATP6V1D-005 67350632-67360265 protein_coding
  ENST00000555335 ATP6V1D-007 67348855-67359794 retained_intron
  ENST00000555431 ATP6V1D-014 67338251-67359787 protein_coding
  ENST00000555474 ATP6V1D-002 67338071-67359803 protein_coding
  ENST00000555625 ATP6V1D-011 67336678-67349061 nonsense_mediated_decay
  ENST00000555723 ATP6V1D-015 67338555-67352937 protein_coding
  ENST00000556058 ATP6V1D-009 67343372-67359794 nonsense_mediated_decay
  ENST00000557244 ATP6V1D-008 67352731-67359742 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000216442ENST00000554236ENST00000555335ENST00000555431ENST00000555474
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000216442 N/A 16.198±0.00 N/A 3.677±0.00 N/A N/A N/A 5.950±0.00 21.798±3.05 19.187±0.03 N/A
ENST00000554236 N/A N/A N/A N/A 21.694±0.00 N/A N/A N/A N/A N/A N/A
ENST00000555335 8.123±0.00 N/A N/A 12.817±0.00 20.287±0.00 N/A N/A N/A N/A N/A N/A
ENST00000555431 2.481±0.00 48.793±0.00 20.791±0.00 17.370±0.00 16.486±0.00 39.245±0.00 N/A N/A 10.507±0.00 11.118±0.00 31.776±0.00
ENST00000555474 N/A 40.320±0.00 18.978±0.00 14.075±0.00 27.184±0.00 35.478±0.00 10.182±0.00 23.812±0.00 N/A 16.082±0.76 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00010I CIL_00010I_0001 CGP 14:67189393-67335819
CIL_00010H CIL_00010H_0001 CGP 14:67241109-67360265
CIL_0001KG CIL_0001KG_0002 CGP 14:67294371-67386516

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005765 IDA lysosomal membrane
GO:0005813 IDA centrosome
GO:0005829 TAS cytosol
GO:0005929 IDA cilium
GO:0006879 TAS cellular iron ion homeostasis
GO:0008286 TAS insulin receptor signaling pathway
GO:0015992 IEA proton transport
GO:0016020 IDA membrane
GO:0016471 IDA vacuolar proton-transporting V-type ATPase complex
GO:0033572 TAS transferrin transport
GO:0042384 IMP cilium assembly
GO:0042626 IEA ATPase activity, coupled to transmembrane movement of substances
GO:0051701 TAS interaction with host
GO:0055085 IEA:TAS transmembrane transport
GO:0061512 IMP protein localization to cilium
GO:0070062 IDA extracellular vesicular exosome
GO:0090382 TAS phagosome maturation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000011175 atp6v1d ATPase, H+ transporting, V1 subunit D protein_coding Danio_rerio
ENSMUSG00000021114 Atp6v1d ATPase, H+ transporting, lysosomal V1 subunit D protein_coding Mus_musculus

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