C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: leucine rich repeat containing 74A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100565 LRRC74A 9606 + 14:76826372-76870302 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000216450 LRRC74A-001 76826372-76870302 nonsense_mediated_decay
  ENST00000393774 LRRC74A-004 76826372-76870206 protein_coding
  ENST00000460005 LRRC74A-003 76826387-76844472 processed_transcript
  ENST00000484640 LRRC74A-002 76826384-76870302 nonsense_mediated_decay
  ENST00000555189 LRRC74A-007 76826387-76828669 protein_coding
  ENST00000557453 LRRC74A-008 76826382-76831293 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastLiverLungOvaryTestisENST00000216450ENST00000393774ENST00000460005ENST00000555189
Transcript ID Adipose Adrenal Brain Breast Liver Lung Ovary Testis
ENST00000216450 0.010±0.00 N/A N/A N/A N/A N/A 0.022±0.00 1.620±0.50
ENST00000393774 N/A N/A 0.098±0.00 0.052±0.00 N/A 0.016±0.00 0.142±0.11 1.330±0.00
ENST00000460005 0.020±0.00 0.026±0.00 0.044±0.00 N/A 0.123±0.00 0.090±0.00 0.019±0.00 N/A
ENST00000555189 0.048±0.00 N/A 0.041±0.00 N/A 0.397±0.00 N/A 0.118±0.05 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VF CIL_0007VF_0001 VISTA 14:76618298-77221354
CIL_0008WP CIL_0008WP_0001 VISTA 14:76629854-77233554
CIL_000867 CIL_000867_0001 VISTA 14:76636452-77239164
CIL_0007VT CIL_0007VT_0001 VISTA 14:76740528-77345010
CIL_000772 CIL_000772_0001 CGP 14:76787243-76870302
CIL_00076Y CIL_00076Y_0001 CGP 14:76826372-77028699

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060062 LRRC74A leucine rich repeat containing 74A protein_coding Danio_rerio
ENSMUSG00000059114 Lrrc74 leucine rich repeat containing 74A protein_coding Mus_musculus

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