C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: polypeptide N-acetylgalactosaminyltransferase 16
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100626 GALNT16 9606 + 14:69259277-69357033 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000337827 GALNT16-002 69259964-69357033 protein_coding
  ENST00000448469 GALNT16-003 69260201-69352671 protein_coding
  ENST00000553471 GALNT16-001 69260174-69354466 nonsense_mediated_decay
  ENST00000553669 GALNT16-004 69260291-69348092 protein_coding
  ENST00000553740 GALNT16-005 69298541-69326025 processed_transcript
  ENST00000554317 GALNT16-007 69259642-69320843 processed_transcript
  ENST00000554858 GALNT16-008 69259277-69260337 processed_transcript
  ENST00000555920 GALNT16-009 69259642-69324742 processed_transcript
  ENST00000556677 GALNT16-006 69332522-69339623 processed_transcript
  ENST00000556829 GALNT16-010 69352029-69353968 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000337827ENST00000448469ENST00000553471ENST00000553669ENST00000553740
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000337827 2.481±0.00 1.752±0.00 N/A 2.034±1.26 0.777±0.60 0.791±0.53 0.783±0.00 1.091±1.02 0.225±0.12 0.632±0.47 0.463±0.35 0.440±0.29 0.238±0.06 0.784±0.20
ENST00000448469 3.537±0.00 N/A 0.242±0.00 2.869±1.21 5.449±0.00 N/A 4.348±2.37 4.461±0.00 N/A 1.321±0.00 0.735±0.00 1.159±0.00 0.284±0.00 2.263±0.01
ENST00000553471 N/A N/A 0.177±0.00 0.251±0.00 N/A N/A 0.438±0.00 0.878±0.00 0.177±0.13 N/A N/A 0.058±0.00 N/A N/A
ENST00000553669 3.274±0.00 N/A 0.521±0.00 4.318±3.28 0.961±0.00 2.419±0.00 N/A N/A 1.689±0.00 0.351±0.00 N/A 0.866±0.60 0.280±0.00 N/A
ENST00000553740 N/A N/A N/A N/A N/A 2.427±0.00 6.581±0.00 1.196±0.00 N/A 1.190±0.00 N/A 0.258±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002CI CIL_0002CI_0001 CGP 14:69191511-69357033
CIL_0006UI CIL_0006UI_0001 CGP 14:69259277-69398627

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004653 IEA polypeptide N-acetylgalactosaminyltransferase activity
GO:0005794 IEA Golgi apparatus
GO:0006486 IEA protein glycosylation
GO:0016021 IEA integral component of membrane
GO:0030246 IEA carbohydrate binding
GO:0046872 IEA metal ion binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053190 galnt16 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 16 protein_coding Danio_rerio
ENSMUSG00000021130 Galnt16 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 16 protein_coding Mus_musculus

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