C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, FYVE domain containing 21
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100711 ZFYVE21 9606 + 14:103715730-103733668 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000216602 ZFYVE21-001 103715730-103733668 protein_coding
  ENST00000311141 ZFYVE21-002 103715808-103733662 protein_coding
  ENST00000553512 ZFYVE21-007 103715827-103728983 nonsense_mediated_decay
  ENST00000553724 ZFYVE21-004 103727454-103731445 retained_intron
  ENST00000554255 ZFYVE21-006 103715808-103728092 retained_intron
  ENST00000554630 ZFYVE21-008 103715831-103729211 retained_intron
  ENST00000554757 ZFYVE21-005 103731431-103733663 retained_intron
  ENST00000555163 ZFYVE21-010 103727898-103730037 protein_coding
  ENST00000555501 ZFYVE21-003 103724509-103733664 retained_intron
  ENST00000556610 ZFYVE21-009 103715839-103729847 nonsense_mediated_decay
  ENST00000556795 ZFYVE21-011 103728786-103729394 retained_intron
  ENST00000602552 ZFYVE21-012 103729490-103730031 retained_intron

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000216602ENST00000311141ENST00000554630ENST00000554757ENST00000555501ENST00000556795
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000216602 N/A N/A N/A 14.501±10.47 N/A 0.982±0.00 N/A N/A 2.218±0.00 N/A N/A N/A N/A 5.810±0.00
ENST00000311141 25.042±0.00 21.986±0.00 3.126±0.00 10.078±4.73 21.101±12.87 24.797±22.87 9.164±6.86 17.574±13.66 7.284±1.70 10.072±8.58 4.185±1.20 32.122±23.53 28.686±5.23 29.826±7.77
ENST00000554630 N/A N/A N/A 6.419±0.00 N/A N/A N/A 3.994±0.00 N/A N/A N/A N/A N/A N/A
ENST00000554757 N/A N/A N/A N/A N/A N/A 0.360±0.00 N/A N/A N/A 2.067±0.00 N/A N/A N/A
ENST00000555501 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.228±0.00 N/A N/A N/A N/A
ENST00000556795 N/A N/A N/A N/A N/A N/A N/A 4.547±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00020Z CIL_00020Z_0001 CGP 14:103697609-103733668
CIL_0006X2 CIL_0006X2_0001 CGP 14:103715730-103847590

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005768 IEA endosome
GO:0030054 IEA cell junction
GO:0031410 IEA cytoplasmic vesicle
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000027887 zfyve21 zinc finger, FYVE domain containing 21 protein_coding Danio_rerio
ENSMUSG00000021286 Zfyve21 zinc finger, FYVE domain containing 21 protein_coding Mus_musculus

Loading