C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cyclin B1 interacting protein 1, E3 ubiquitin protein ligase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100814 CCNB1IP1 9606 - 14:20311368-20333312 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000353689 CCNB1IP1-201 20311368-20333312 protein_coding
  ENST00000358932 CCNB1IP1-005 20311370-20333288 protein_coding
  ENST00000398160 CCNB1IP1-002 20311368-20333010 protein_coding
  ENST00000398163 CCNB1IP1-004 20311429-20329377 protein_coding
  ENST00000398169 CCNB1IP1-001 20311370-20329380 protein_coding
  ENST00000437553 CCNB1IP1-202 20311368-20333312 protein_coding
  ENST00000553291 CCNB1IP1-011 20316512-20329373 protein_coding
  ENST00000553516 CCNB1IP1-012 20317596-20329270 processed_transcript
  ENST00000554047 CCNB1IP1-014 20314211-20316408 nonsense_mediated_decay
  ENST00000554184 CCNB1IP1-013 20311683-20316265 nonsense_mediated_decay
  ENST00000555348 CCNB1IP1-003 20319051-20333312 processed_transcript
  ENST00000555963 CCNB1IP1-008 20325589-20333273 processed_transcript
  ENST00000556563 CCNB1IP1-010 20316414-20329374 protein_coding
  ENST00000556854 CCNB1IP1-006 20311704-20333303 nonsense_mediated_decay
  ENST00000557114 CCNB1IP1-009 20325539-20330888 processed_transcript
  ENST00000557665 CCNB1IP1-007 20313637-20333282 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000353689ENST00000358932ENST00000398163ENST00000398169ENST00000437553ENST00000553516ENST00000554184ENST00000556854ENST00000557665
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000353689 6.958±0.00 10.968±0.00 N/A 4.378±2.45 6.632±0.00 3.336±0.00 1.127±0.00 7.741±6.66 2.511±0.38 7.227±0.00 N/A 9.131±5.23 4.824±1.73 14.262±1.62
ENST00000358932 4.819±0.00 N/A 3.084±0.00 3.507±0.07 4.621±1.20 8.708±0.00 9.763±8.34 6.154±0.00 1.875±1.05 17.492±0.00 5.292±0.00 13.687±9.20 10.182±3.34 N/A
ENST00000398163 N/A N/A N/A N/A N/A 1.600±0.00 N/A N/A N/A 4.507±0.00 1.617±0.00 N/A N/A N/A
ENST00000398169 N/A N/A N/A 3.848±0.00 N/A N/A N/A 6.798±0.00 1.001±0.00 N/A N/A N/A N/A N/A
ENST00000437553 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.430±0.00
ENST00000553516 N/A N/A 3.148±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554184 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 24.345±0.00 7.705±0.00 21.302±0.00
ENST00000556854 N/A N/A 0.897±0.00 N/A N/A N/A N/A N/A N/A N/A 2.207±0.00 N/A N/A N/A
ENST00000557665 N/A N/A N/A 1.143±0.00 2.408±0.00 N/A N/A N/A 2.331±0.00 2.736±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001OC CIL_0001OC_0001 CGP 14:20256558-20333312
CIL_0001OD CIL_0001OD_0001 CGP 14:20311368-20357905

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000795 ISS synaptonemal complex
GO:0001825 IEA blastocyst formation
GO:0005515 IPI protein binding
GO:0007131 ISS reciprocal meiotic recombination
GO:0007286 IEA spermatid development
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0051026 ISS chiasma assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000071470 Ccnb1ip1 cyclin B1 interacting protein 1 protein_coding Mus_musculus

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