C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: embryonal Fyn-associated substrate
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100842 EFS 9606 - 14:23356402-23365752 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000216733 EFS-003 23356402-23365633 protein_coding
  ENST00000351354 EFS-001 23356656-23365752 protein_coding
  ENST00000429593 EFS-201 23356403-23365633 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000216733ENST00000351354ENST00000429593
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000216733 2.960±0.00 0.851±0.00 N/A 3.765±2.49 2.021±1.33 1.673±1.28 0.471±0.29 N/A 1.597±0.00 1.847±1.69 0.185±0.02 7.206±4.51 4.642±0.93 2.954±2.00
ENST00000351354 1.259±0.00 1.149±0.00 N/A 5.209±0.00 1.994±1.65 2.675±0.00 0.525±0.00 0.990±0.00 0.135±0.00 1.521±1.08 0.923±0.00 3.202±1.86 2.178±0.59 1.741±0.11
ENST00000429593 N/A N/A 0.095±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090C CIL_00090C_0001 VISTA 14:23078458-23681621
CIL_0009BW CIL_0009BW_0001 VISTA 14:23137378-23739005
CIL_0008Q4 CIL_0008Q4_0001 VISTA 14:23138150-23738498
CIL_0008QH CIL_0008QH_0001 VISTA 14:23142404-23743714
CIL_00051E CIL_00051E_0001 CGP 14:23346306-23365752
CIL_0003BW CIL_0003BW_0001 CGP 14:23356402-23376403

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 TAS cytoplasm
GO:0007155 IEA cell adhesion
GO:0017124 IEA SH3 domain binding
GO:0019904 IPI protein domain specific binding
GO:0035556 TAS intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000088835 CR388231.3 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000022203 Efs embryonal Fyn-associated substrate protein_coding Mus_musculus

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