C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transient receptor potential cation channel, subfamily C, member 4 associated protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100991 TRPC4AP 9606 - 20:35002404-35092871 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000252015 TRPC4AP-001 35002404-35092871 protein_coding
  ENST00000451813 TRPC4AP-002 35002404-35092807 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000252015ENST00000451813
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000252015 9.530±0.00 6.632±0.00 N/A 8.054±1.47 8.733±5.13 4.682±0.04 4.013±2.54 9.628±5.22 7.247±0.00 6.363±0.00 8.796±2.87 12.198±4.63 20.442±0.59 10.925±1.61
ENST00000451813 9.073±0.00 14.015±0.00 1.035±0.00 9.625±5.66 11.139±0.00 6.526±0.00 4.441±3.16 7.514±0.00 7.147±0.00 4.485±0.00 19.717±0.00 5.914±1.92 9.902±6.39 10.292±2.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005BE CIL_0005BE_0001 CGP 20:34928430-35002437
CIL_0006RZ CIL_0006RZ_0002 CGP 20:34975403-35092871
CIL_0006AB CIL_0006AB_0001 CGP 20:35002404-35147364

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005886 TAS plasma membrane
GO:0006511 IDA ubiquitin-dependent protein catabolic process
GO:0016567 IEA protein ubiquitination
GO:0019902 IDA phosphatase binding
GO:0031464 IDA Cul4A-RING E3 ubiquitin ligase complex
GO:0034220 TAS ion transmembrane transport
GO:0055085 TAS transmembrane transport
GO:0070588 TAS calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018840 trpc4apa transient receptor potential cation channel, subfamily C, member 4 associated protein a protein_coding Danio_rerio
ENSDARG00000020647 trpc4apb transient receptor potential cation channel, subfamily C, member 4 associated protein b protein_coding Danio_rerio
ENSMUSG00000038324 Trpc4ap transient receptor potential cation channel, subfamily C, member 4 associated protein protein_coding Mus_musculus

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