C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NDRG family member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000101079 NDRG3 9606 - 20:36651766-36746078 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000349004 NDRG3-001 36651766-36746078 protein_coding
  ENST00000359675 NDRG3-005 36651766-36746067 protein_coding
  ENST00000373773 NDRG3-201 36652375-36721787 protein_coding
  ENST00000373803 NDRG3-003 36651766-36746053 protein_coding
  ENST00000422536 NDRG3-004 36671341-36700675 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000349004ENST00000359675ENST00000373773ENST00000373803ENST00000422536
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000349004 4.382±0.00 2.215±0.00 N/A 25.183±6.63 4.369±1.09 2.538±0.00 2.860±1.19 3.188±1.68 1.528±1.33 3.427±2.33 0.680±0.48 7.940±2.79 5.979±3.18 N/A
ENST00000359675 N/A 5.055±0.00 N/A 11.119±3.56 N/A 6.383±0.00 2.926±0.00 N/A 0.939±0.00 N/A 2.439±0.00 2.822±0.27 N/A N/A
ENST00000373773 N/A N/A 0.851±0.00 N/A 0.975±0.00 N/A N/A 2.309±0.00 N/A 2.060±0.00 1.192±0.44 5.467±0.00 2.465±0.00 12.944±0.00
ENST00000373803 N/A N/A N/A N/A N/A N/A 2.259±0.00 N/A N/A N/A N/A N/A 1.552±0.00 N/A
ENST00000422536 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.713±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000304 CIL_000304_0002 CGP 20:36612318-36746078
CIL_0000XP CIL_0000XP_0001 CGP 20:36651766-36773818

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 IDA cytoplasm
GO:0007283 NAS spermatogenesis
GO:0030154 NAS cell differentiation
GO:0030308 NAS negative regulation of cell growth
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010052 ndrg3b N-myc downstream regulated family member 3b protein_coding Danio_rerio
ENSDARG00000013087 ndrg3a N-myc downstream regulated family member 3a protein_coding Danio_rerio
ENSMUSG00000027634 Ndrg3 N-myc downstream regulated gene 3 protein_coding Mus_musculus

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