C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sel-1 suppressor of lin-12-like 2 (C. elegans)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000101251 SEL1L2 9606 - 20:13849247-13996443 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000284951 SEL1L2-002 13849403-13990609 protein_coding
  ENST00000378072 SEL1L2-007 13849403-13990616 protein_coding
  ENST00000423870 SEL1L2-003 13849403-13990612 nonsense_mediated_decay
  ENST00000473203 SEL1L2-011 13913862-13996443 protein_coding
  ENST00000475649 SEL1L2-009 13849398-13870184 nonsense_mediated_decay
  ENST00000476952 SEL1L2-006 13913464-13919123 processed_transcript
  ENST00000477435 SEL1L2-005 13928039-13931763 processed_transcript
  ENST00000482196 SEL1L2-008 13849247-13851419 processed_transcript
  ENST00000486903 SEL1L2-001 13849403-13995333 processed_transcript
  ENST00000492548 SEL1L2-010 13850011-13870214 processed_transcript
  ENST00000495437 SEL1L2-004 13927984-13931774 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000284951ENST00000475649ENST00000482196ENST00000486903
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000284951 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.042±0.33
ENST00000475649 0.068±0.00 0.398±0.00 0.092±0.00 6.877±0.00 0.079±0.00 0.288±0.00 0.205±0.00 0.420±0.00 1.799±1.02 0.119±0.00 N/A
ENST00000482196 0.037±0.00 1.409±0.00 N/A N/A 0.019±0.00 N/A N/A N/A 1.547±0.00 0.197±0.00 N/A
ENST00000486903 N/A N/A 0.039±0.00 N/A N/A N/A N/A N/A 0.100±0.00 N/A 2.537±1.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002DD CIL_0002DD_0001 CGP 20:13784950-13996443
CIL_0002DE CIL_0002DE_0001 CGP 20:13849247-16053197

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000074764 Sel1l2 sel-1 suppressor of lin-12-like 2 (C. elegans) protein_coding Mus_musculus

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