C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nucleolar protein 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000101746 NOL4 9606 - 18:33851100-34224952 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000261592 NOL4-001 33851100-34223551 protein_coding
  ENST00000535384 NOL4-006 33852290-34048594 protein_coding
  ENST00000538587 NOL4-005 33852589-34222092 protein_coding
  ENST00000586309 NOL4-009 34105125-34222289 nonsense_mediated_decay
  ENST00000586314 NOL4-004 33852450-34222318 nonsense_mediated_decay
  ENST00000586553 NOL4-014 33883365-34023639 protein_coding
  ENST00000587953 NOL4-011 34104124-34158629 processed_transcript
  ENST00000587971 NOL4-013 34104054-34222323 processed_transcript
  ENST00000588280 NOL4-010 34093461-34156693 processed_transcript
  ENST00000588355 NOL4-008 34223935-34224910 processed_transcript
  ENST00000589544 NOL4-002 33852450-34223471 protein_coding
  ENST00000590712 NOL4-003 33852589-34223205 protein_coding
  ENST00000590846 NOL4-007 34223332-34224952 processed_transcript
  ENST00000591917 NOL4-012 34104052-34222110 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261592ENST00000535384ENST00000538587ENST00000586314ENST00000586553ENST00000587953ENST00000588280ENST00000588355ENST00000589544ENST00000590712ENST00000591917
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261592 0.006±0.00 0.025±0.00 N/A N/A N/A 0.010±0.00 N/A 0.070±0.00 N/A N/A 0.017±0.00 0.019±0.00 1.777±0.00
ENST00000535384 N/A N/A N/A 0.011±0.00 N/A 0.010±0.00 N/A N/A N/A 0.208±0.00 0.021±0.01 0.012±0.00 N/A
ENST00000538587 N/A N/A 2.546±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586314 N/A N/A N/A N/A N/A N/A N/A 0.115±0.00 N/A N/A N/A N/A N/A
ENST00000586553 N/A N/A N/A 0.086±0.00 N/A 0.031±0.00 1.066±0.00 0.468±0.00 N/A 0.141±0.00 0.020±0.00 0.092±0.00 9.201±0.00
ENST00000587953 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.058±0.00 N/A N/A
ENST00000588280 N/A 0.409±0.00 N/A 0.105±0.00 N/A N/A N/A N/A N/A N/A N/A 0.068±0.00 N/A
ENST00000588355 N/A N/A N/A N/A 1.477±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589544 N/A N/A 1.645±0.00 N/A N/A N/A N/A N/A N/A 0.011±0.00 N/A N/A 4.184±0.00
ENST00000590712 N/A N/A 2.084±0.00 N/A N/A N/A 0.248±0.22 0.266±0.00 0.138±0.05 N/A N/A 0.011±0.00 2.722±0.00
ENST00000591917 N/A N/A N/A N/A 0.517±0.00 N/A N/A N/A N/A N/A N/A 0.019±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006PC CIL_0006PC_0001 CGP 18:33578615-34224952
CIL_0006PG CIL_0006PG_0001 CGP 18:33851100-34891844

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 TAS RNA binding
GO:0005730 IEA nucleolus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000041923 Nol4 nucleolar protein 4 protein_coding Mus_musculus

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