C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ALG13, UDP-N-acetylglucosaminyltransferase subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000101901 ALG13 9606 + X:111665811-111760649 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000251943 ALG13-201 111681170-111760645 protein_coding
  ENST00000371979 ALG13-002 111681118-111690172 protein_coding
  ENST00000394780 ALG13-001 111681150-111760649 protein_coding
  ENST00000436609 ALG13-023 111681657-111760649 protein_coding
  ENST00000460092 ALG13-005 111727643-111736879 processed_transcript
  ENST00000461669 ALG13-007 111737027-111760161 processed_transcript
  ENST00000468657 ALG13-021 111681179-111688254 nonsense_mediated_decay
  ENST00000470704 ALG13-004 111688727-111709029 retained_intron
  ENST00000470971 ALG13-024 111681207-111760649 nonsense_mediated_decay
  ENST00000471924 ALG13-029 111681267-111708166 nonsense_mediated_decay
  ENST00000473389 ALG13-019 111681189-111688128 protein_coding
  ENST00000474121 ALG13-008 111744846-111753166 protein_coding
  ENST00000482374 ALG13-012 111681192-111688134 nonsense_mediated_decay
  ENST00000482742 ALG13-015 111681663-111688040 protein_coding
  ENST00000485371 ALG13-009 111752746-111759804 retained_intron
  ENST00000486353 ALG13-027 111681198-111708998 nonsense_mediated_decay
  ENST00000486578 ALG13-006 111727419-111736933 processed_transcript
  ENST00000487141 ALG13-020 111665811-111713297 nonsense_mediated_decay
  ENST00000487243 ALG13-010 111757278-111759899 retained_intron
  ENST00000489033 ALG13-017 111681216-111688219 nonsense_mediated_decay
  ENST00000490774 ALG13-022 111718219-111723881 processed_transcript
  ENST00000492038 ALG13-016 111681194-111688642 nonsense_mediated_decay
  ENST00000495283 ALG13-013 111681198-111760016 nonsense_mediated_decay
  ENST00000610588 ALG13-202 111681170-111760645 protein_coding
  ENST00000621367 ALG13-203 111681170-111760645 protein_coding
  ENST00000622986 ALG13-026 111681195-111685278 protein_coding
  ENST00000622997 ALG13-025 111681170-111713261 nonsense_mediated_decay
  ENST00000623144 ALG13-014 111681204-111760375 nonsense_mediated_decay
  ENST00000623148 ALG13-018 111681267-111760256 nonsense_mediated_decay
  ENST00000623189 ALG13-032 111681813-111688132 protein_coding
  ENST00000623255 ALG13-028 111681234-111688097 protein_coding
  ENST00000623310 ALG13-031 111759812-111760649 protein_coding
  ENST00000623622 ALG13-030 111717879-111728270 protein_coding
  ENST00000624161 ALG13-003 111681176-111760644 nonsense_mediated_decay
  ENST00000624881 ALG13-011 111681179-111712493 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000251943ENST00000371979ENST00000394780ENST00000436609ENST00000468657ENST00000470971ENST00000473389ENST00000482742ENST00000492038ENST00000495283ENST00000610588ENST00000621367ENST00000622986ENST00000622997ENST00000623144ENST00000623148ENST00000624161
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000251943 N/A N/A N/A N/A N/A N/A 0.982±0.00 N/A N/A N/A N/A 2.293±0.00 N/A N/A
ENST00000371979 N/A 1.151±0.00 1.452±0.00 N/A 2.400±0.00 N/A N/A 0.712±0.00 N/A 3.808±0.00 N/A N/A N/A N/A
ENST00000394780 0.707±0.00 N/A 0.686±0.00 1.312±0.17 1.478±0.22 1.254±0.00 0.438±0.00 0.704±0.00 N/A 0.809±0.00 0.374±0.02 3.166±0.00 N/A 2.760±0.17
ENST00000436609 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.508±0.00 N/A N/A 2.240±0.00
ENST00000468657 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.076±0.00 N/A
ENST00000470971 1.123±0.00 N/A N/A N/A 1.507±0.00 N/A N/A N/A N/A N/A N/A 3.149±0.00 N/A 4.375±0.00
ENST00000473389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.547±0.00 N/A
ENST00000482742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.088±0.00 N/A
ENST00000492038 1.779±0.00 3.638±0.00 N/A N/A N/A 2.590±0.00 N/A 6.898±0.00 4.142±0.00 1.680±0.00 N/A N/A N/A N/A
ENST00000495283 N/A N/A N/A N/A N/A N/A N/A N/A 1.387±0.00 N/A N/A 1.547±0.00 N/A N/A
ENST00000610588 N/A N/A N/A N/A 1.207±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621367 N/A 1.101±0.00 N/A 1.082±0.00 N/A 0.845±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622986 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.639±0.00 N/A N/A N/A
ENST00000622997 N/A N/A N/A N/A N/A N/A N/A 6.288±0.00 N/A N/A N/A N/A N/A N/A
ENST00000623144 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.929±0.00 1.253±0.00 5.097±0.00
ENST00000623148 N/A N/A 0.598±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000624161 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.595±0.00 0.454±0.00 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004577 IEA N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase activity
GO:0005789 TAS endoplasmic reticulum membrane
GO:0005975 IEA carbohydrate metabolic process
GO:0006488 TAS dolichol-linked oligosaccharide biosynthetic process
GO:0006508 IEA proteolysis
GO:0008234 IEA cysteine-type peptidase activity
GO:0016758 IEA transferase activity, transferring hexosyl groups
GO:0018279 TAS protein N-linked glycosylation via asparagine
GO:0030246 IEA carbohydrate binding
GO:0030259 IEA lipid glycosylation
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054374 alg13 asparagine-linked glycosylation 13 homolog (S. cerevisiae) protein_coding Danio_rerio

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