C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphoglycerate kinase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000102144 PGK1 9606 + X:78065188-78129296 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000373316 PGK1-001 78104174-78129296 protein_coding
  ENST00000474281 PGK1-002 78122839-78123338 processed_transcript
  ENST00000476531 PGK1-005 78124944-78126267 processed_transcript
  ENST00000477335 PGK1-003 78065188-78113844 processed_transcript
  ENST00000491291 PGK1-004 78065216-78122903 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000373316ENST00000476531ENST00000491291
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000373316 5.529±0.00 6.434±0.00 1.871±0.00 23.499±0.52 5.608±1.09 5.056±3.44 7.589±3.82 14.893±8.95 4.686±0.16 5.862±0.99 8.734±3.15 11.608±4.20 20.540±12.85 4.612±1.80
ENST00000476531 52.636±0.00 62.901±0.00 N/A 121.597±0.00 70.107±0.00 76.813±0.00 40.023±0.00 146.777±0.00 17.831±0.00 33.076±0.00 N/A 44.036±8.35 N/A 39.696±0.00
ENST00000491291 N/A N/A N/A 76.966±0.00 9.114±0.00 38.515±24.74 N/A 78.128±65.96 12.209±0.00 10.805±0.00 35.767±0.00 43.603±21.95 68.509±0.00 7.129±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001YZ CIL_0001YZ_0001 CGP X:78065188-78139706

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004618 ISS:IEA phosphoglycerate kinase activity
GO:0005515 IPI protein binding
GO:0005524 ISS ATP binding
GO:0005829 TAS cytosol
GO:0005975 TAS carbohydrate metabolic process
GO:0006006 TAS glucose metabolic process
GO:0006094 TAS gluconeogenesis
GO:0006096 IEA glycolytic process
GO:0016020 IDA membrane
GO:0016310 ISS phosphorylation
GO:0030855 IEP epithelial cell differentiation
GO:0044281 TAS small molecule metabolic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054191 pgk1 phosphoglycerate kinase 1 protein_coding Danio_rerio
ENSMUSG00000062070 Pgk1 phosphoglycerate kinase 1 protein_coding Mus_musculus
ENSMUSG00000066632 Pgk1-rs7 phosphoglycerate kinase-1, related sequence-7 protein_coding Mus_musculus

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