C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Nedd4 family interacting protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000102471 NDFIP2 9606 + 13:79481124-79556075 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000218652 NDFIP2-001 79481152-79556075 protein_coding
  ENST00000465762 NDFIP2-002 79481457-79552578 nonsense_mediated_decay
  ENST00000487865 NDFIP2-004 79481453-79553195 protein_coding
  ENST00000494647 NDFIP2-003 79518992-79520975 processed_transcript
  ENST00000612570 NDFIP2-201 79481124-79556070 protein_coding
  ENST00000620924 NDFIP2-005 79481474-79554096 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000218652ENST00000487865ENST00000612570ENST00000620924
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000218652 1.918±0.00 1.446±0.00 N/A 17.445±0.00 1.921±0.12 2.680±1.57 1.522±0.48 3.466±1.00 2.231±0.32 1.881±0.90 0.856±0.76 4.895±1.55 3.065±0.80 2.568±0.00
ENST00000487865 2.647±0.00 N/A 3.154±0.00 N/A 2.582±0.02 2.099±0.00 2.721±1.62 3.236±0.00 2.404±0.00 3.588±0.00 1.415±0.01 5.284±3.64 7.773±1.29 8.110±2.19
ENST00000612570 N/A N/A N/A 14.925±11.02 N/A N/A N/A N/A N/A N/A 0.090±0.00 1.373±0.00 N/A 1.448±0.00
ENST00000620924 1.080±0.00 0.809±0.00 N/A N/A 1.071±0.00 2.561±0.06 1.832±0.60 6.571±2.84 2.059±0.15 2.651±0.60 0.795±0.47 6.675±5.12 5.833±0.78 2.367±0.96

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002EH CIL_0002EH_0001 CGP 13:79311824-79556075
CIL_00083L CIL_00083L_0001 VISTA 13:79358111-79960495

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004871 IMP signal transducer activity
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005768 IEA endosome
GO:0005783 IDA endoplasmic reticulum
GO:0005794 IDA Golgi apparatus
GO:0007165 IMP signal transduction
GO:0010629 IMP negative regulation of gene expression
GO:0016021 IEA integral component of membrane
GO:0031398 IMP positive regulation of protein ubiquitination
GO:0032410 IMP negative regulation of transporter activity
GO:0043123 IMP positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0048471 IDA perinuclear region of cytoplasm
GO:0050699 IPI WW domain binding
GO:0051224 IMP negative regulation of protein transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000033928 ndfip2 Nedd4 family interacting protein 2 protein_coding Danio_rerio
ENSMUSG00000053253 Ndfip2 Nedd4 family interacting protein 2 protein_coding Mus_musculus

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