C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glycerophosphodiester phosphodiesterase domain containing 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000102886 GDPD3 9606 - 16:30104810-30113856 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000360688 GDPD3-002 30104810-30113537 retained_intron
  ENST00000406256 GDPD3-001 30104810-30113856 protein_coding
  ENST00000565704 GDPD3-003 30104810-30108498 retained_intron
  ENST00000566434 GDPD3-004 30104815-30108432 nonsense_mediated_decay
  ENST00000566613 GDPD3-005 30104844-30111396 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000360688ENST00000406256ENST00000566434
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000360688 N/A 0.859±0.00 N/A 1.413±0.90 2.532±0.00 0.110±0.01 1.121±0.00 0.767±0.00 0.583±0.29 N/A 10.887±10.64 8.083±4.23 0.982±0.23
ENST00000406256 0.545±0.00 N/A 0.319±0.00 1.146±0.21 2.416±0.04 0.092±0.00 1.203±0.00 0.227±0.00 1.086±0.00 N/A 2.707±2.08 5.910±2.95 0.505±0.00
ENST00000566434 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.477±0.00 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0006071 IEA glycerol metabolic process
GO:0006629 IEA lipid metabolic process
GO:0008081 IEA phosphoric diester hydrolase activity
GO:0008889 IEA glycerophosphodiester phosphodiesterase activity
GO:0016021 IEA integral component of membrane
GO:0046872 IEA metal ion binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006944 gdpd3b glycerophosphodiester phosphodiesterase domain containing 3b protein_coding Danio_rerio
ENSDARG00000074466 gdpd3a glycerophosphodiester phosphodiesterase domain containing 3a protein_coding Danio_rerio
ENSMUSG00000030703 Gdpd3 glycerophosphodiester phosphodiesterase domain containing 3 protein_coding Mus_musculus

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