C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nuclear transport factor 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000102898 NUTF2 9606 + 16:67846732-67872567 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000219169 NUTF2-001 67846732-67872567 protein_coding
  ENST00000567105 NUTF2-002 67846935-67870852 protein_coding
  ENST00000568233 NUTF2-007 67846935-67868838 retained_intron
  ENST00000568390 NUTF2-006 67846923-67868741 retained_intron
  ENST00000568396 NUTF2-004 67847211-67871323 protein_coding
  ENST00000569436 NUTF2-003 67847161-67871323 protein_coding
  ENST00000570026 NUTF2-005 67847342-67868496 retained_intron
  ENST00000587481 NUTF2-012 67869960-67872567 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000219169ENST00000568396ENST00000569436
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000219169 6.286±0.00 N/A N/A 8.700±2.36 5.799±2.85 8.147±0.00 0.945±0.00 N/A 1.269±0.00 4.839±0.71 4.759±2.17 9.129±6.28 10.526±1.44 20.592±0.00
ENST00000568396 N/A N/A N/A N/A N/A N/A N/A 4.469±0.00 N/A N/A N/A N/A N/A N/A
ENST00000569436 29.938±0.00 60.738±0.00 3.731±0.00 19.540±4.89 17.296±10.64 15.221±9.79 2.422±0.00 24.939±20.54 11.593±2.64 N/A 19.460±8.71 35.485±19.24 62.218±21.31 59.713±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003XE CIL_0003XE_0001 CGP 16:67806765-67847811
CIL_000189 CIL_000189_0001 CGP 16:67828157-67847811
CIL_0007FR CIL_0007FR_0001 CGP 16:67842082-67872567
CIL_0007FS CIL_0007FS_0001 CGP 16:67846732-67884503

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005215 TAS transporter activity
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005643 TAS nuclear pore
GO:0005829 TAS cytosol
GO:0006611 IDA protein export from nucleus
GO:0006810 IEA transport
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056531 nutf2 nuclear transport factor 2 protein_coding Danio_rerio
ENSMUSG00000008450 Nutf2 nuclear transport factor 2 protein_coding Mus_musculus
ENSMUSG00000071497 Nutf2-ps1 nuclear transport factor 2, pseudogene 1 protein_coding Mus_musculus

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