C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: fatty acid 2-hydroxylase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000103089 FA2H 9606 - 16:74712955-74774831 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000219368 FA2H-001 74712955-74774825 protein_coding
  ENST00000562145 FA2H-003 74712955-74717106 retained_intron
  ENST00000567683 FA2H-002 74713598-74774831 nonsense_mediated_decay
  ENST00000569949 FA2H-004 74718999-74741269 protein_coding
  ENST00000618933 FA2H-005 74725956-74726247 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000219368ENST00000562145ENST00000567683ENST00000618933
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000219368 N/A N/A 0.128±0.00 10.057±7.81 0.728±0.17 0.238±0.00 N/A 3.541±0.00 N/A 1.231±0.00 0.017±0.00 2.404±2.33 1.595±0.48 1.759±0.00
ENST00000562145 N/A N/A N/A N/A N/A N/A N/A 0.040±0.00 N/A N/A N/A N/A N/A N/A
ENST00000567683 0.128±0.00 0.101±0.00 N/A N/A N/A 0.577±0.00 0.204±0.00 N/A 0.111±0.00 N/A N/A 2.178±0.00 0.219±0.00 0.674±0.00
ENST00000618933 N/A N/A 0.797±0.00 N/A 2.418±0.00 N/A 0.571±0.00 N/A N/A 0.413±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000168 CIL_000168_0001 CGP 16:74671855-74774831
CIL_0002PJ CIL_0002PJ_0001 CGP 16:74712955-75000173

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001949 IEA sebaceous gland cell differentiation
GO:0005506 IEA iron ion binding
GO:0005783 IEA endoplasmic reticulum
GO:0006631 IEA fatty acid metabolic process
GO:0006633 IEA fatty acid biosynthetic process
GO:0006665 IEA sphingolipid metabolic process
GO:0008219 IEA cell death
GO:0016021 IEA integral component of membrane
GO:0016491 IEA oxidoreductase activity
GO:0020037 IEA heme binding
GO:0030258 IEA lipid modification
GO:0032286 IEA central nervous system myelin maintenance
GO:0032287 IEA peripheral nervous system myelin maintenance
GO:0042127 IEA regulation of cell proliferation
GO:0042634 IEA regulation of hair cycle
GO:0046872 IEA metal ion binding
GO:0055114 IEA oxidation-reduction process
GO:0080132 IEA fatty acid alpha-hydroxylase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000090063 fa2h fatty acid 2-hydroxylase protein_coding Danio_rerio
ENSMUSG00000033579 Fa2h fatty acid 2-hydroxylase protein_coding Mus_musculus

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