C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: hydroxysteroid dehydrogenase like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000103160 HSDL1 9606 - 16:84122146-84145192 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000219439 HSDL1-001 84122281-84145188 protein_coding
  ENST00000434463 HSDL1-002 84124123-84145169 protein_coding
  ENST00000562224 HSDL1-005 84130328-84145156 protein_coding
  ENST00000564998 HSDL1-004 84131111-84145175 protein_coding
  ENST00000565275 HSDL1-007 84122678-84123344 processed_transcript
  ENST00000567294 HSDL1-003 84130961-84145192 retained_intron
  ENST00000568857 HSDL1-006 84130319-84144438 protein_coding
  ENST00000619773 HSDL1-008 84122146-84125204 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000219439ENST00000434463ENST00000562224ENST00000565275ENST00000567294ENST00000619773
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000219439 1.827±0.00 0.856±0.00 1.040±0.00 7.472±1.03 0.771±0.13 1.570±1.30 3.720±1.41 4.143±0.00 1.689±0.00 1.708±0.76 N/A 4.081±1.01 2.842±0.36 7.704±0.65
ENST00000434463 N/A N/A N/A N/A N/A 0.802±0.00 N/A N/A 1.507±0.00 1.441±0.00 3.622±0.00 N/A N/A N/A
ENST00000562224 N/A N/A N/A 9.149±0.00 3.308±0.00 1.505±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565275 2.588±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567294 N/A N/A N/A N/A 2.114±0.00 N/A N/A 0.869±0.00 N/A N/A N/A N/A N/A N/A
ENST00000619773 N/A 0.536±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.183±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002AP CIL_0002AP_0001 CGP 16:84053761-84145192
CIL_0004ZQ CIL_0004ZQ_0001 CGP 16:84122146-84178767

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IEA mitochondrion
GO:0008152 IEA metabolic process
GO:0016491 IEA oxidoreductase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041736 hsdl1 hydroxysteroid dehydrogenase like 1 protein_coding Danio_rerio
ENSMUSG00000034189 Hsdl1 hydroxysteroid dehydrogenase like 1 protein_coding Mus_musculus

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