C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000103174 NAGPA 9606 - 16:5024844-5034141 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000312251 NAGPA-001 5024844-5033934 protein_coding
  ENST00000381955 NAGPA-007 5024844-5033934 protein_coding
  ENST00000561580 NAGPA-002 5031028-5033939 retained_intron
  ENST00000562037 NAGPA-010 5028946-5033643 nonsense_mediated_decay
  ENST00000562346 NAGPA-019 5028120-5033636 protein_coding
  ENST00000562746 NAGPA-004 5024872-5033918 nonsense_mediated_decay
  ENST00000563578 NAGPA-005 5024930-5033632 protein_coding
  ENST00000564397 NAGPA-006 5024872-5030158 retained_intron
  ENST00000564922 NAGPA-008 5031843-5034141 processed_transcript
  ENST00000565876 NAGPA-011 5027316-5033338 nonsense_mediated_decay
  ENST00000566137 NAGPA-016 5027278-5028403 retained_intron
  ENST00000567739 NAGPA-013 5027290-5029118 retained_intron
  ENST00000568202 NAGPA-003 5024910-5033926 retained_intron
  ENST00000568528 NAGPA-015 5028072-5028614 processed_transcript
  ENST00000569296 NAGPA-012 5027301-5033358 nonsense_mediated_decay
  ENST00000569793 NAGPA-018 5030314-5030651 processed_transcript
  ENST00000591478 NAGPA-020 5030442-5033628 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonKidneyLiverLungMuscleOvaryPlacentaENST00000312251ENST00000562746ENST00000563578ENST00000564397ENST00000568202
Transcript ID Adipose Adrenal Bladder Breast Colon Kidney Liver Lung Muscle Ovary Placenta
ENST00000312251 2.771±0.00 N/A N/A 4.660±0.00 2.326±0.00 5.575±0.00 4.734±0.00 N/A N/A 5.614±0.26 8.432±1.43
ENST00000562746 N/A 9.640±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563578 N/A N/A N/A 2.404±0.00 N/A N/A N/A 3.362±0.00 1.224±0.00 N/A N/A
ENST00000564397 N/A N/A 0.460±0.00 N/A N/A N/A N/A 0.403±0.00 N/A N/A N/A
ENST00000568202 N/A N/A N/A N/A N/A 1.427±0.00 N/A N/A 0.631±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00004S CIL_00004S_0001 CGP 16:4958317-5034141

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003944 IEA N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase activity
GO:0005515 IEA protein binding
GO:0005794 IEA Golgi apparatus
GO:0005975 TAS carbohydrate metabolic process
GO:0006464 TAS cellular protein modification process
GO:0006486 IEA protein glycosylation
GO:0006622 TAS protein targeting to lysosome
GO:0007040 TAS lysosome organization
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075149 NAGPA N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase protein_coding Danio_rerio
ENSMUSG00000023143 Nagpa N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase protein_coding Mus_musculus

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