C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cysteine-rich secretory protein LCCL domain containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000103196 CRISPLD2 9606 + 16:84819984-84920768 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000262424 CRISPLD2-001 84819984-84909510 protein_coding
  ENST00000563066 CRISPLD2-011 84842003-84873110 protein_coding
  ENST00000564567 CRISPLD2-007 84820003-84880725 protein_coding
  ENST00000565561 CRISPLD2-006 84819997-84840023 retained_intron
  ENST00000566151 CRISPLD2-010 84819985-84838551 protein_coding
  ENST00000566165 CRISPLD2-013 84889244-84920768 nonsense_mediated_decay
  ENST00000566431 CRISPLD2-005 84819992-84863166 processed_transcript
  ENST00000566789 CRISPLD2-012 84849217-84866993 protein_coding
  ENST00000567845 CRISPLD2-002 84819991-84907112 protein_coding
  ENST00000569090 CRISPLD2-008 84820005-84846150 protein_coding
  ENST00000569262 CRISPLD2-009 84820017-84873508 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262424ENST00000563066ENST00000566789ENST00000567845ENST00000569262
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262424 49.334±0.00 23.171±0.00 2.905±0.00 6.733±0.00 6.720±3.03 25.182±20.05 7.035±4.92 5.237±4.70 8.822±6.19 60.422±53.19 4.212±1.94 10.939±8.29 51.768±7.60 39.824±30.85
ENST00000563066 N/A N/A N/A 0.344±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566789 N/A N/A N/A N/A N/A N/A N/A 2.422±0.00 N/A N/A N/A N/A N/A N/A
ENST00000567845 N/A N/A N/A N/A N/A N/A 1.495±0.00 N/A 6.891±0.00 N/A N/A 4.136±0.00 N/A N/A
ENST00000569262 N/A N/A N/A N/A N/A N/A N/A 0.443±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000I6 CIL_0000I6_0001 CGP 16:84819984-85011535

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005539 IEA glycosaminoglycan binding
GO:0005576 IEA extracellular region
GO:0008201 IEA heparin binding
GO:0030133 IDA transport vesicle
GO:0030198 IEA extracellular matrix organization
GO:0030324 IEA lung development
GO:0031012 IEA extracellular matrix
GO:0060325 IMP face morphogenesis
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000088595 CRISPLD2 cysteine-rich secretory protein LCCL domain containing 2 protein_coding Danio_rerio
ENSMUSG00000031825 Crispld2 cysteine-rich secretory protein LCCL domain containing 2 protein_coding Mus_musculus

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