C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NME/NM23 nucleoside diphosphate kinase 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000103202 NME4 9606 + 16:396725-410367 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000219479 NME4-001 397209-400759 protein_coding
  ENST00000382940 NME4-011 397209-400506 protein_coding
  ENST00000397722 NME4-002 396725-400746 protein_coding
  ENST00000433358 NME4-009 397237-400648 protein_coding
  ENST00000444498 NME4-012 397200-410367 nonsense_mediated_decay
  ENST00000448828 NME4-006 397199-400734 nonsense_mediated_decay
  ENST00000450036 NME4-010 397742-400416 protein_coding
  ENST00000454619 NME4-005 396769-399474 protein_coding
  ENST00000460297 NME4-003 397208-400633 retained_intron
  ENST00000468031 NME4-004 398410-400749 retained_intron
  ENST00000620944 NME4-201 397192-400753 protein_coding
  ENST00000621774 NME4-202 397192-400753 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000219479ENST00000382940ENST00000448828ENST00000450036ENST00000460297ENST00000620944ENST00000621774
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000219479 N/A 28.108±0.00 3.705±0.00 4.351±0.00 2.495±0.00 12.761±10.73 25.223±0.00 15.297±0.00 35.736±29.10 16.389±15.21 6.240±0.19 38.658±30.73 37.464±20.07 N/A
ENST00000382940 38.320±0.00 64.082±0.00 N/A 26.936±0.00 129.215±0.00 68.328±0.00 20.046±0.00 35.031±0.00 N/A 28.700±0.00 6.976±0.00 45.420±20.60 20.359±8.59 39.405±25.93
ENST00000448828 N/A N/A N/A N/A N/A 1.966±0.00 1.143±0.00 N/A N/A 10.119±0.00 N/A 31.665±0.00 6.596±0.01 9.671±0.00
ENST00000450036 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.347±0.00
ENST00000460297 N/A N/A N/A N/A N/A N/A 0.317±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000620944 5.998±0.00 N/A N/A 9.455±0.00 N/A 18.745±0.00 N/A N/A N/A N/A 4.271±0.00 23.664±0.00 N/A 16.425±0.00
ENST00000621774 10.240±0.00 N/A N/A N/A 36.854±0.00 N/A N/A 14.439±0.00 N/A N/A N/A N/A N/A 29.818±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094P CIL_00094P_0001 VISTA 16:-195470-405616
CIL_0008HK CIL_0008HK_0001 VISTA 16:-187027-414801

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004550 IEA:EXP nucleoside diphosphate kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005739 TAS mitochondrion
GO:0005743 TAS mitochondrial inner membrane
GO:0006165 IEA nucleoside diphosphate phosphorylation
GO:0006183 IEA GTP biosynthetic process
GO:0006228 IEA UTP biosynthetic process
GO:0006241 IEA CTP biosynthetic process
GO:0009116 TAS nucleoside metabolic process
GO:0015949 TAS nucleobase-containing small molecule interconversion
GO:0032403 IEA protein complex binding
GO:0044281 TAS small molecule metabolic process
GO:0046872 IEA metal ion binding
GO:0055086 TAS nucleobase-containing small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000088390 nme4 non-metastatic cells 4, protein expressed in protein_coding Danio_rerio
ENSMUSG00000024177 Nme4 NME/NM23 nucleoside diphosphate kinase 4 protein_coding Mus_musculus

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