C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lysosomal protein transmembrane 4 beta
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000104341 LAPTM4B 9606 + 8:97775057-97853013 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000445593 LAPTM4B-001 97775057-97853013 protein_coding
  ENST00000517924 LAPTM4B-003 97775849-97819164 protein_coding
  ENST00000521545 LAPTM4B-002 97775776-97851474 protein_coding
  ENST00000619747 LAPTM4B-201 97775057-97852598 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000445593ENST00000517924ENST00000521545ENST00000619747
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000445593 N/A N/A N/A N/A N/A 0.871±0.00 N/A N/A N/A N/A 1.306±0.00 10.774±0.00 N/A N/A
ENST00000517924 N/A N/A N/A N/A N/A N/A N/A 2.790±0.00 N/A N/A N/A N/A N/A N/A
ENST00000521545 N/A N/A 5.211±0.00 8.835±0.00 9.000±0.00 N/A 15.151±0.00 N/A 6.340±0.00 N/A 20.581±0.00 11.017±0.00 7.035±0.00 N/A
ENST00000619747 17.390±0.00 38.522±0.00 3.327±0.00 13.822±9.06 9.511±6.30 12.047±7.75 37.023±26.37 26.206±25.53 3.344±0.76 12.959±9.59 16.005±7.57 30.296±14.32 11.622±2.43 29.907±4.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001KW CIL_0001KW_0001 CGP 8:97644179-97853013
CIL_0001KV CIL_0001KV_0001 CGP 8:97775057-98036716

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0006810 IEA transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035870 laptm4b lysosomal associated protein transmembrane 4 beta protein_coding Danio_rerio
ENSMUSG00000022257 Laptm4b lysosomal-associated protein transmembrane 4B protein_coding Mus_musculus

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