C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000104356 POP1 9606 + 8:98117297-98159834 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000349693 POP1-002 98117840-98158412 protein_coding
  ENST00000401707 POP1-001 98117312-98159834 protein_coding
  ENST00000517435 POP1-003 98155958-98157667 retained_intron
  ENST00000522319 POP1-004 98117297-98130040 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000349693ENST00000401707ENST00000517435ENST00000522319
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000349693 0.350±0.00 0.842±0.00 0.487±0.00 N/A N/A 0.319±0.10 0.113±0.00 1.566±0.00 0.679±0.10 0.386±0.04 0.180±0.00 0.635±0.19 0.475±0.08 0.812±0.22
ENST00000401707 N/A 0.176±0.00 N/A 0.567±0.00 0.566±0.00 0.172±0.00 N/A N/A 0.116±0.00 N/A N/A 0.465±0.26 N/A 1.073±0.45
ENST00000517435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.219±0.00 N/A N/A N/A
ENST00000522319 N/A N/A 1.766±0.00 N/A N/A N/A 0.359±0.00 N/A N/A 0.895±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000684 CIL_000684_0001 CGP 8:98102344-98159834
CIL_0008YL CIL_0008YL_0001 VISTA 8:98116253-98717204
CIL_0003C8 CIL_0003C8_0001 CGP 8:98117297-98294393

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000171 IDA ribonuclease MRP activity
GO:0000172 IDA ribonuclease MRP complex
GO:0001682 IEA tRNA 5'-leader removal
GO:0004526 IEA:IDA ribonuclease P activity
GO:0005515 IPI protein binding
GO:0005615 IDA extracellular space
GO:0005655 IDA nucleolar ribonuclease P complex
GO:0006396 IEA RNA processing
GO:0016078 IDA tRNA catabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0090501 IDA RNA phosphodiester bond hydrolysis
GO:0090502 IEA RNA phosphodiester bond hydrolysis, endonucleolytic

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000087815 pop1 processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000022325 Pop1 processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae) protein_coding Mus_musculus

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